Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 EEF1DP3-203ENST00000566025 782 ntBASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 AC053503.5-201ENST00000601508 636 ntBASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEM56-RWDD3S4R434 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 AC116562.4-201ENST00000641316 2276 ntBASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 IGHV3-19-201ENST00000521488 291 ntBASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 AL035685.1-201ENST00000636663 812 ntBASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEM56-RWDD3S4R434 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 AC233992.3-201ENST00000607491 485 ntBASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEM56-RWDD3S4R434 AC061975.6-201ENST00000579045 1553 ntBASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 AC125437.2-201ENST00000625180 2167 ntBASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM56-RWDD3S4R434 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms