Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VPS25Q9BRG1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 AC124067.4-201ENST00000519691 2379 ntBASIC14.36□□□□□ -0.11
VPS25Q9BRG1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VPS25Q9BRG1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS25Q9BRG1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 AC093503.3-201ENST00000624917 2352 ntBASIC14.34□□□□□ -0.11
VPS25Q9BRG1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 AC068587.6-202ENST00000641839 5619 ntBASIC14.34□□□□□ -0.11
VPS25Q9BRG1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS25Q9BRG1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms