RNA–Protein interactions for RNA: ENST00000375651.6

HSPA1A-201, Transcript of heat shock protein family A (Hsp70) member 1A, humanhuman

APPRIS P1 BASIC

Gene HSPA1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA1A-201ENST00000375651 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
HSPA1A-201ENST00000375651 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
HSPA1A-201ENST00000375651 ZCCHC6Q5VYS8 1495 aaKnown RBP29■■■□□ 2.23
HSPA1A-201ENST00000375651 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
HSPA1A-201ENST00000375651 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
HSPA1A-201ENST00000375651 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
HSPA1A-201ENST00000375651 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
HSPA1A-201ENST00000375651 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
HSPA1A-201ENST00000375651 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
HSPA1A-201ENST00000375651 HRCP23327 699 aa28.04■■■□□ 2.08
HSPA1A-201ENST00000375651 ABCC9O60706 1549 aa27.85■■■□□ 2.05
HSPA1A-201ENST00000375651 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
HSPA1A-201ENST00000375651 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
HSPA1A-201ENST00000375651 MYT1Q01538 1121 aa27.33■■□□□ 1.97
HSPA1A-201ENST00000375651 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
HSPA1A-201ENST00000375651 TRIM26Q12899 539 aaPredicted RBP27.16■■□□□ 1.94
HSPA1A-201ENST00000375651 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
HSPA1A-201ENST00000375651 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
HSPA1A-201ENST00000375651 RB1CC1Q8TDY2 1594 aa26.98■■□□□ 1.91
HSPA1A-201ENST00000375651 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
HSPA1A-201ENST00000375651 NACADO15069 1562 aa26.9■■□□□ 1.9
HSPA1A-201ENST00000375651 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
HSPA1A-201ENST00000375651 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
HSPA1A-201ENST00000375651 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
HSPA1A-201ENST00000375651 SCAF1Q9H7N4 1312 aaKnown RBP26.46■■□□□ 1.83
HSPA1A-201ENST00000375651 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
HSPA1A-201ENST00000375651 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
HSPA1A-201ENST00000375651 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
HSPA1A-201ENST00000375651 WIZO95785 1651 aa26.36■■□□□ 1.81
HSPA1A-201ENST00000375651 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
HSPA1A-201ENST00000375651 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
HSPA1A-201ENST00000375651 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
HSPA1A-201ENST00000375651 PABPN1Q86U42 306 aaKnown RBP eCLIP26.14■■□□□ 1.77
HSPA1A-201ENST00000375651 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
HSPA1A-201ENST00000375651 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.761e-9■□□□□ 9.7
HSPA1A-201ENST00000375651 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
HSPA1A-201ENST00000375651 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
HSPA1A-201ENST00000375651 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
HSPA1A-201ENST00000375651 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
HSPA1A-201ENST00000375651 EEA1Q15075 1411 aa25.86■■□□□ 1.73
HSPA1A-201ENST00000375651 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
HSPA1A-201ENST00000375651 ABCC8Q09428 1581 aa25.83■■□□□ 1.72
HSPA1A-201ENST00000375651 CCER1Q8TC90 406 aaPredicted RBP25.82■■□□□ 1.72
HSPA1A-201ENST00000375651 TNIKQ9UKE5 1360 aa25.81■■□□□ 1.72
HSPA1A-201ENST00000375651 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
HSPA1A-201ENST00000375651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.78■■□□□ 1.72
HSPA1A-201ENST00000375651 ACIN1Q9UKV3 1341 aaKnown RBP25.69■■□□□ 1.7
HSPA1A-201ENST00000375651 SOGA1O94964 1423 aa25.64■■□□□ 1.7
HSPA1A-201ENST00000375651 GOLGA3Q08378 1498 aa25.59■■□□□ 1.69
HSPA1A-201ENST00000375651 DIEXFQ68CQ4 756 aaKnown RBP25.58■■□□□ 1.69
HSPA1A-201ENST00000375651 CSRNP3Q8WYN3 585 aa25.57■■□□□ 1.68
HSPA1A-201ENST00000375651 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
HSPA1A-201ENST00000375651 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
HSPA1A-201ENST00000375651 NEUROD1Q13562 356 aa25.51■■□□□ 1.67
HSPA1A-201ENST00000375651 KIF21BO75037 1637 aa25.49■■□□□ 1.67
HSPA1A-201ENST00000375651 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
HSPA1A-201ENST00000375651 CEP164Q9UPV0 1460 aa25.42■■□□□ 1.66
HSPA1A-201ENST00000375651 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
HSPA1A-201ENST00000375651 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
HSPA1A-201ENST00000375651 GTF3C3Q9Y5Q9 886 aa25.34■■□□□ 1.65
HSPA1A-201ENST00000375651 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
HSPA1A-201ENST00000375651 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
HSPA1A-201ENST00000375651 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
HSPA1A-201ENST00000375651 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
HSPA1A-201ENST00000375651 CLIP1P30622 1438 aa25.23■■□□□ 1.63
HSPA1A-201ENST00000375651 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
HSPA1A-201ENST00000375651 CC2D2AQ9P2K1 1620 aa25.18■■□□□ 1.62
HSPA1A-201ENST00000375651 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
HSPA1A-201ENST00000375651 TOP2BQ02880 1626 aa25.07■■□□□ 1.6
HSPA1A-201ENST00000375651 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
HSPA1A-201ENST00000375651 PRKCSHP14314 528 aaPredicted RBP25.05■■□□□ 1.6
HSPA1A-201ENST00000375651 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
HSPA1A-201ENST00000375651 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
HSPA1A-201ENST00000375651 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
HSPA1A-201ENST00000375651 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
HSPA1A-201ENST00000375651 APLP2Q06481 763 aa24.97■■□□□ 1.59
HSPA1A-201ENST00000375651 MIER1Q8N108 512 aa24.92■■□□□ 1.58
HSPA1A-201ENST00000375651 PRXQ9BXM0 1461 aa24.89■■□□□ 1.57
HSPA1A-201ENST00000375651 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
HSPA1A-201ENST00000375651 ARAP1Q96P48 1450 aa24.82■■□□□ 1.56
HSPA1A-201ENST00000375651 DHX57Q6P158 1386 aaKnown RBP24.79■■□□□ 1.56
HSPA1A-201ENST00000375651 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
HSPA1A-201ENST00000375651 HMGXB3Q12766 1538 aa24.77■■□□□ 1.56
HSPA1A-201ENST00000375651 CUX2O14529 1486 aa24.76■■□□□ 1.55
HSPA1A-201ENST00000375651 RRBP1Q9P2E9 1410 aaKnown RBP24.76■■□□□ 1.55
HSPA1A-201ENST00000375651 ANP32EQ9BTT0 268 aa24.66■■□□□ 1.54
HSPA1A-201ENST00000375651 CUX1P39880 1505 aa24.64■■□□□ 1.54
HSPA1A-201ENST00000375651 KIF27Q86VH2 1401 aa24.64■■□□□ 1.53
HSPA1A-201ENST00000375651 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
HSPA1A-201ENST00000375651 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
HSPA1A-201ENST00000375651 MAP3K1Q13233 1512 aa24.55■■□□□ 1.52
HSPA1A-201ENST00000375651 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
HSPA1A-201ENST00000375651 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
HSPA1A-201ENST00000375651 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
HSPA1A-201ENST00000375651 CFTRP13569 1480 aa24.52■■□□□ 1.52
HSPA1A-201ENST00000375651 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
HSPA1A-201ENST00000375651 TIAM1Q13009 1591 aa24.41■■□□□ 1.5
HSPA1A-201ENST00000375651 MAPKBP1O60336 1514 aa24.36■■□□□ 1.49
HSPA1A-201ENST00000375651 SUPT16HQ9Y5B9 1047 aaKnown RBP24.35■■□□□ 1.49
HSPA1A-201ENST00000375651 RAB3GAP2Q9H2M9 1393 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms