Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VMA21Q3ZAQ7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 AC004854.2-201ENST00000608450 1441 ntBASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 FP700111.2-201ENST00000619190 1892 ntBASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 AL157384.1-201ENST00000445995 2473 ntBASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.54■□□□□ 0.24
VMA21Q3ZAQ7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 AC116050.2-201ENST00000612102 1779 ntBASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 HCG11-201ENST00000411553 5696 ntBASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.53■□□□□ 0.24
VMA21Q3ZAQ7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 GABARAPL3-202ENST00000624044 1851 ntBASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 LINC01006-201ENST00000333319 2292 ntBASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.52■□□□□ 0.24
VMA21Q3ZAQ7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
VMA21Q3ZAQ7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VMA21Q3ZAQ7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
VMA21Q3ZAQ7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VMA21Q3ZAQ7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.52■□□□□ 0.23
VMA21Q3ZAQ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VMA21Q3ZAQ7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 SLC7A5P1-201ENST00000568957 537 ntBASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VMA21Q3ZAQ7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms