Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 SMT3YDR510W 306 nt0.74□□□□□ -2.29
RKR1Q04781 YER066C-AYER066C-A 501 nt0.74□□□□□ -2.29
RKR1Q04781 MGE1YOR232W 687 nt0.74□□□□□ -2.29
RKR1Q04781 SSP1YHR184W 1716 nt0.74□□□□□ -2.29
RKR1Q04781 TFA2YKR062W 987 nt0.74□□□□□ -2.29
RKR1Q04781 AIM14YGL160W 1713 nt0.74□□□□□ -2.29
RKR1Q04781 WAR1YML076C 2835 nt0.73□□□□□ -2.29
RKR1Q04781 HIR3YJR140C 4947 nt0.73□□□□□ -2.29
RKR1Q04781 YER107W-AYER107W-A 321 nt0.73□□□□□ -2.29
RKR1Q04781 EAP1YKL204W 1899 nt0.73□□□□□ -2.29
RKR1Q04781 ASI3YNL008C 2031 nt0.72□□□□□ -2.29
RKR1Q04781 BUD30YDL151C 582 nt0.72□□□□□ -2.29
RKR1Q04781 TGL2YDR058C 981 nt0.72□□□□□ -2.29
RKR1Q04781 YJL026C-AYJL026C-A 222 nt0.72□□□□□ -2.29
RKR1Q04781 CAT2YML042W 2013 nt0.72□□□□□ -2.29
RKR1Q04781 SET4YJL105W 1683 nt0.71□□□□□ -2.3
RKR1Q04781 ECM18YDR125C 1362 nt0.71□□□□□ -2.3
RKR1Q04781 YGR149WYGR149W 1299 nt0.71□□□□□ -2.3
RKR1Q04781 LTP1YPR073C 486 nt0.71□□□□□ -2.3
RKR1Q04781 EST2YLR318W 2655 nt0.71□□□□□ -2.3
RKR1Q04781 AI2Q0055 2565 nt0.71□□□□□ -2.3
RKR1Q04781 GTR2YGR163W 1026 nt0.7□□□□□ -2.3
RKR1Q04781 HNT3YOR258W 654 nt0.7□□□□□ -2.3
RKR1Q04781 snR14snR14 160 nt0.7□□□□□ -2.3
RKR1Q04781 NSL1YPL233W 651 nt0.7□□□□□ -2.3
RKR1Q04781 RPS29BYDL061C 171 nt0.7□□□□□ -2.3
RKR1Q04781 FSH1YHR049W 732 nt0.7□□□□□ -2.3
RKR1Q04781 RRT15YLR162W-A 189 nt0.7□□□□□ -2.3
RKR1Q04781 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
RKR1Q04781 CSE1YGL238W 2883 nt0.69□□□□□ -2.3
RKR1Q04781 PAU3YCR104W 375 nt0.69□□□□□ -2.3
RKR1Q04781 UBC13YDR092W 462 nt0.69□□□□□ -2.3
RKR1Q04781 YGL193CYGL193C 312 nt0.69□□□□□ -2.3
RKR1Q04781 HTA2YBL003C 399 nt0.69□□□□□ -2.3
RKR1Q04781 YLL054CYLL054C 2532 nt0.68□□□□□ -2.3
RKR1Q04781 MAD3YJL013C 1548 nt0.68□□□□□ -2.3
RKR1Q04781 ARP10YDR106W 855 nt0.67□□□□□ -2.3
RKR1Q04781 YMR031W-AYMR031W-A 327 nt0.67□□□□□ -2.3
RKR1Q04781 SEC8YPR055W 3198 nt0.67□□□□□ -2.3
RKR1Q04781 NOP19YGR251W 591 nt0.66□□□□□ -2.3
RKR1Q04781 MRPL40YPL173W 894 nt0.66□□□□□ -2.3
RKR1Q04781 HAP4YKL109W 1665 nt0.66□□□□□ -2.3
RKR1Q04781 YKL069WYKL069W 543 nt0.66□□□□□ -2.3
RKR1Q04781 MSA2YKR077W 1092 nt0.66□□□□□ -2.3
RKR1Q04781 HHT2YNL031C 411 nt0.66□□□□□ -2.3
RKR1Q04781 YNR066CYNR066C 1311 nt0.65□□□□□ -2.3
RKR1Q04781 HUL5YGL141W 2733 nt0.65□□□□□ -2.31
RKR1Q04781 HTA1YDR225W 399 nt0.65□□□□□ -2.31
RKR1Q04781 CLC1YGR167W 702 nt0.65□□□□□ -2.31
RKR1Q04781 RIF2YLR453C 1188 nt0.65□□□□□ -2.31
RKR1Q04781 YBR032WYBR032W 303 nt0.65□□□□□ -2.31
RKR1Q04781 ESC2YDR363W 1371 nt0.65□□□□□ -2.31
RKR1Q04781 YJL202CYJL202C 348 nt0.64□□□□□ -2.31
RKR1Q04781 YJR029WYJR029W 5268 nt0.64□□□□□ -2.31
RKR1Q04781 YPR137C-BYPR137C-B 5268 nt0.64□□□□□ -2.31
RKR1Q04781 CDC50YCR094W 1176 nt0.63□□□□□ -2.31
RKR1Q04781 MUK1YPL070W 1839 nt0.63□□□□□ -2.31
RKR1Q04781 RLM1YPL089C 2031 nt0.63□□□□□ -2.31
RKR1Q04781 BST1YFL025C 3090 nt0.62□□□□□ -2.31
RKR1Q04781 CSM2YIL132C 642 nt0.62□□□□□ -2.31
RKR1Q04781 YOR314WYOR314W 330 nt0.62□□□□□ -2.31
RKR1Q04781 PRM4YPL156C 855 nt0.62□□□□□ -2.31
RKR1Q04781 YBR063CYBR063C 1215 nt0.62□□□□□ -2.31
RKR1Q04781 CRD1YDL142C 852 nt0.61□□□□□ -2.31
RKR1Q04781 PRS3YHL011C 963 nt0.61□□□□□ -2.31
RKR1Q04781 CDA2YLR308W 939 nt0.61□□□□□ -2.31
RKR1Q04781 HMLALPHA1YCL066W 528 nt0.6□□□□□ -2.31
RKR1Q04781 MATALPHA1YCR040W 528 nt0.6□□□□□ -2.31
RKR1Q04781 RPL9AYGL147C 576 nt0.6□□□□□ -2.31
RKR1Q04781 DYN3YMR299C 939 nt0.6□□□□□ -2.31
RKR1Q04781 IES5YER092W 378 nt0.59□□□□□ -2.31
RKR1Q04781 MED8YBR193C 672 nt0.59□□□□□ -2.31
RKR1Q04781 URC2YDR520C 2319 nt0.59□□□□□ -2.31
RKR1Q04781 MLH3YPL164C 2148 nt0.59□□□□□ -2.32
RKR1Q04781 SKO1YNL167C 1944 nt0.58□□□□□ -2.32
RKR1Q04781 SDC1YDR469W 528 nt0.58□□□□□ -2.32
RKR1Q04781 YGL177WYGL177W 348 nt0.57□□□□□ -2.32
RKR1Q04781 YNL184CYNL184C 327 nt0.57□□□□□ -2.32
RKR1Q04781 SEC59YMR013C 1560 nt0.56□□□□□ -2.32
RKR1Q04781 YIL068W-AYIL068W-A 384 nt0.56□□□□□ -2.32
RKR1Q04781 YKR075W-AYKR075W-A 270 nt0.56□□□□□ -2.32
RKR1Q04781 SGD1YLR336C 2700 nt0.56□□□□□ -2.32
RKR1Q04781 GRX2YDR513W 432 nt0.55□□□□□ -2.32
RKR1Q04781 YER091C-AYER091C-A 222 nt0.55□□□□□ -2.32
RKR1Q04781 YUH1YJR099W 711 nt0.55□□□□□ -2.32
RKR1Q04781 RPL6BYLR448W 531 nt0.55□□□□□ -2.32
RKR1Q04781 YNL034WYNL034W 1839 nt0.54□□□□□ -2.32
RKR1Q04781 NSE4YDL105W 1209 nt0.54□□□□□ -2.32
RKR1Q04781 SNA4YDL123W 423 nt0.54□□□□□ -2.32
RKR1Q04781 YER119C-AYER119C-A 372 nt0.54□□□□□ -2.32
RKR1Q04781 CTK3YML112W 891 nt0.54□□□□□ -2.32
RKR1Q04781 SPP381YBR152W 876 nt0.53□□□□□ -2.32
RKR1Q04781 KAP122YGL016W 3246 nt0.53□□□□□ -2.32
RKR1Q04781 BSC2YDR275W 708 nt0.53□□□□□ -2.33
RKR1Q04781 CIC1YHR052W 1131 nt0.53□□□□□ -2.33
RKR1Q04781 PBP4YDL053C 558 nt0.52□□□□□ -2.33
RKR1Q04781 VTI1YMR197C 654 nt0.52□□□□□ -2.33
RKR1Q04781 STE24YJR117W 1362 nt0.52□□□□□ -2.33
RKR1Q04781 ESA1YOR244W 1338 nt0.51□□□□□ -2.33
RKR1Q04781 ATP16YDL004W 483 nt0.51□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms