Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 GPI8YDR331W 1236 nt4.04□□□□□ -1.76
SSF1P38789 RPS17BYDR447C 411 nt4.04□□□□□ -1.76
SSF1P38789 FUS1YCL027W 1539 nt4.04□□□□□ -1.76
SSF1P38789 ECM5YMR176W 4236 nt4.04□□□□□ -1.76
SSF1P38789 ALA1YOR335C 2877 nt4.04□□□□□ -1.76
SSF1P38789 MET10YFR030W 3108 nt4.04□□□□□ -1.76
SSF1P38789 TAF2YCR042C 4224 nt4.03□□□□□ -1.76
SSF1P38789 FAR1YJL157C 2493 nt4.03□□□□□ -1.76
SSF1P38789 YNL034WYNL034W 1839 nt4.03□□□□□ -1.76
SSF1P38789 YMR31YFR049W 372 nt4.03□□□□□ -1.76
SSF1P38789 YIL058WYIL058W 285 nt4.03□□□□□ -1.76
SSF1P38789 FLO5YHR211W 3228 nt4.03□□□□□ -1.76
SSF1P38789 TOM70YNL121C 1854 nt4.03□□□□□ -1.77
SSF1P38789 MSR1YHR091C 1932 nt4.02□□□□□ -1.77
SSF1P38789 CAJ1YER048C 1176 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)DtK(UUU)D 73 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)G1tK(UUU)G1 73 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)G2tK(UUU)G2 73 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)KtK(UUU)K 73 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)LtK(UUU)L 73 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)OtK(UUU)O 73 nt4.02□□□□□ -1.77
SSF1P38789 tK(UUU)PtK(UUU)P 73 nt4.02□□□□□ -1.77
SSF1P38789 YHL037CYHL037C 402 nt4.02□□□□□ -1.77
SSF1P38789 tT(UGU)Q1tT(UGU)Q1 76 nt4.02□□□□□ -1.77
SSF1P38789 BOI1YBL085W 2943 nt4.02□□□□□ -1.77
SSF1P38789 RIX1YHR197W 2292 nt4.01□□□□□ -1.77
SSF1P38789 YDL152WYDL152W 366 nt4.01□□□□□ -1.77
SSF1P38789 YDR250CYDR250C 276 nt4.01□□□□□ -1.77
SSF1P38789 TWF1YGR080W 999 nt4.01□□□□□ -1.77
SSF1P38789 TIM8YJR135W-A 264 nt4.01□□□□□ -1.77
SSF1P38789 YOL019W-AYOL019W-A 153 nt4.01□□□□□ -1.77
SSF1P38789 RPA135YPR010C 3612 nt4□□□□□ -1.77
SSF1P38789 ENA5YDR038C 3276 nt4□□□□□ -1.77
SSF1P38789 ENA2YDR039C 3276 nt4□□□□□ -1.77
SSF1P38789 ENA1YDR040C 3276 nt4□□□□□ -1.77
SSF1P38789 HPA3YEL066W 540 nt4□□□□□ -1.77
SSF1P38789 YIL054WYIL054W 318 nt4□□□□□ -1.77
SSF1P38789 PRE8YML092C 753 nt4□□□□□ -1.77
SSF1P38789 YNL043CYNL043C 321 nt4□□□□□ -1.77
SSF1P38789 YGR027W-BYGR027W-B 5268 nt3.99□□□□□ -1.77
SSF1P38789 YLR227W-BYLR227W-B 5268 nt3.99□□□□□ -1.77
SSF1P38789 YPR158C-DYPR158C-D 5268 nt3.99□□□□□ -1.77
SSF1P38789 SDC1YDR469W 528 nt3.99□□□□□ -1.77
SSF1P38789 FYV4YHR059W 393 nt3.99□□□□□ -1.77
SSF1P38789 SSN8YNL025C 972 nt3.99□□□□□ -1.77
SSF1P38789 BIL1YOR304C-A 231 nt3.99□□□□□ -1.77
SSF1P38789 YTA7YGR270W 4140 nt3.99□□□□□ -1.77
SSF1P38789 RLF2YPR018W 1821 nt3.98□□□□□ -1.77
SSF1P38789 NSP1YJL041W 2472 nt3.98□□□□□ -1.77
SSF1P38789 YJL016WYJL016W 1686 nt3.98□□□□□ -1.77
SSF1P38789 BAT1YHR208W 1182 nt3.98□□□□□ -1.77
SSF1P38789 YKL083WYKL083W 615 nt3.98□□□□□ -1.77
SSF1P38789 YLR154C-HYLR154C-H 132 nt3.98□□□□□ -1.77
SSF1P38789 YLR156C-AYLR156C-A 132 nt3.98□□□□□ -1.77
SSF1P38789 YLR157C-CYLR157C-C 132 nt3.98□□□□□ -1.77
SSF1P38789 YLR159C-AYLR159C-A 132 nt3.98□□□□□ -1.77
SSF1P38789 YPL238CYPL238C 390 nt3.98□□□□□ -1.77
SSF1P38789 SMC3YJL074C 3693 nt3.98□□□□□ -1.77
SSF1P38789 SPB1YCL054W 2526 nt3.98□□□□□ -1.77
SSF1P38789 tV(CAC)DtV(CAC)D 73 nt3.97□□□□□ -1.77
SSF1P38789 tV(CAC)HtV(CAC)H 73 nt3.97□□□□□ -1.77
SSF1P38789 STE23YLR389C 3084 nt3.97□□□□□ -1.77
SSF1P38789 SPA2YLL021W 4401 nt3.97□□□□□ -1.77
SSF1P38789 URM1YIL008W 300 nt3.96□□□□□ -1.78
SSF1P38789 SOD1YJR104C 465 nt3.96□□□□□ -1.78
SSF1P38789 LCL2YLR104W 396 nt3.96□□□□□ -1.78
SSF1P38789 YOR231C-AYOR231C-A 201 nt3.96□□□□□ -1.78
SSF1P38789 BCH1YMR237W 2175 nt3.95□□□□□ -1.78
SSF1P38789 BNA4YBL098W 1383 nt3.95□□□□□ -1.78
SSF1P38789 RMT2YDR465C 1239 nt3.95□□□□□ -1.78
SSF1P38789 ANB1YJR047C 474 nt3.95□□□□□ -1.78
SSF1P38789 SHH3YMR118C 591 nt3.95□□□□□ -1.78
SSF1P38789 YBL108WYBL108W 306 nt3.95□□□□□ -1.78
SSF1P38789 APC2YLR127C 2562 nt3.95□□□□□ -1.78
SSF1P38789 AI2Q0055 2565 nt3.94□□□□□ -1.78
SSF1P38789 YCR022CYCR022C 345 nt3.94□□□□□ -1.78
SSF1P38789 YDR413CYDR413C 576 nt3.94□□□□□ -1.78
SSF1P38789 YER189WYER189W 369 nt3.94□□□□□ -1.78
SSF1P38789 YGR107WYGR107W 450 nt3.94□□□□□ -1.78
SSF1P38789 YAR053WYAR053W 297 nt3.94□□□□□ -1.78
SSF1P38789 YOR073W-AYOR073W-A 234 nt3.94□□□□□ -1.78
SSF1P38789 PSK1YAL017W 4071 nt3.94□□□□□ -1.78
SSF1P38789 YOL057WYOL057W 2136 nt3.94□□□□□ -1.78
SSF1P38789 SWT1YOR166C 1377 nt3.93□□□□□ -1.78
SSF1P38789 YIL166CYIL166C 1629 nt3.93□□□□□ -1.78
SSF1P38789 YDR193WYDR193W 399 nt3.93□□□□□ -1.78
SSF1P38789 TPS2YDR074W 2691 nt3.93□□□□□ -1.78
SSF1P38789 ECM25YJL201W 1800 nt3.93□□□□□ -1.78
SSF1P38789 NTO1YPR031W 2247 nt3.93□□□□□ -1.78
SSF1P38789 ARO1YDR127W 4767 nt3.93□□□□□ -1.78
SSF1P38789 BRO1YPL084W 2535 nt3.92□□□□□ -1.78
SSF1P38789 COX1Q0045 1605 nt3.92□□□□□ -1.78
SSF1P38789 NHP2YDL208W 471 nt3.92□□□□□ -1.78
SSF1P38789 RPS28BYLR264W 204 nt3.92□□□□□ -1.78
SSF1P38789 RPS22BYLR367W 393 nt3.92□□□□□ -1.78
SSF1P38789 YAF9YNL107W 681 nt3.92□□□□□ -1.78
SSF1P38789 STU2YLR045C 2667 nt3.91□□□□□ -1.78
SSF1P38789 SOK1YDR006C 2706 nt3.91□□□□□ -1.78
SSF1P38789 YPK1YKL126W 2043 nt3.91□□□□□ -1.78
SSF1P38789 RPL8BYLL045C 771 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms