Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
COL1A2P08123 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.62■■□□□ 1.21
COL1A2P08123 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
COL1A2P08123 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
COL1A2P08123 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.61■■□□□ 1.21
COL1A2P08123 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.61■■□□□ 1.21
COL1A2P08123 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.61■■□□□ 1.21
COL1A2P08123 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL1A2P08123 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.61■■□□□ 1.21
COL1A2P08123 RPS2P52-201ENST00000469610 820 ntBASIC22.61■■□□□ 1.21
COL1A2P08123 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.61■■□□□ 1.21
COL1A2P08123 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.61■■□□□ 1.21
COL1A2P08123 AL049796.1-201ENST00000565336 1766 ntBASIC22.61■■□□□ 1.21
COL1A2P08123 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.61■■□□□ 1.21
COL1A2P08123 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.61■■□□□ 1.21
COL1A2P08123 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
COL1A2P08123 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL1A2P08123 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL1A2P08123 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL1A2P08123 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
COL1A2P08123 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL1A2P08123 AC027702.1-201ENST00000563810 1770 ntBASIC22.6■■□□□ 1.21
COL1A2P08123 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.6■■□□□ 1.21
COL1A2P08123 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL1A2P08123 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.6■■□□□ 1.21
COL1A2P08123 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL1A2P08123 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
COL1A2P08123 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
COL1A2P08123 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
COL1A2P08123 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.59■■□□□ 1.21
COL1A2P08123 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.59■■□□□ 1.21
COL1A2P08123 KRT17P3-201ENST00000420566 1262 ntBASIC22.59■■□□□ 1.21
COL1A2P08123 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.59■■□□□ 1.21
COL1A2P08123 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.59■■□□□ 1.21
COL1A2P08123 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.59■■□□□ 1.21
COL1A2P08123 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL1A2P08123 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.59■■□□□ 1.21
COL1A2P08123 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.59■■□□□ 1.21
COL1A2P08123 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.58■■□□□ 1.21
COL1A2P08123 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A2P08123 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
COL1A2P08123 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A2P08123 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A2P08123 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A2P08123 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.58■■□□□ 1.21
COL1A2P08123 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL1A2P08123 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
COL1A2P08123 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.58■■□□□ 1.21
COL1A2P08123 AC142381.4-202ENST00000563973 229 ntBASIC22.58■■□□□ 1.21
COL1A2P08123 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.58■■□□□ 1.21
COL1A2P08123 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
COL1A2P08123 MIR2861-201ENST00000636310 90 ntBASIC22.58■■□□□ 1.21
COL1A2P08123 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
COL1A2P08123 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL1A2P08123 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
COL1A2P08123 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
COL1A2P08123 AL024507.2-201ENST00000606070 2574 ntBASIC22.58■■□□□ 1.2
COL1A2P08123 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
COL1A2P08123 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 AC093827.2-201ENST00000512654 315 ntBASIC22.57■■□□□ 1.2
COL1A2P08123 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.57■■□□□ 1.2
COL1A2P08123 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL1A2P08123 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A2P08123 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A2P08123 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
COL1A2P08123 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A2P08123 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A2P08123 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms