Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 MTDHP1-201ENST00000605323 784 ntBASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHAC2Q9Y5I4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 AL023875.1-201ENST00000640777 796 ntBASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHAC2Q9Y5I4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 AC087633.2-202ENST00000565166 1439 ntBASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHAC2Q9Y5I4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 AC211429.1-201ENST00000415277 523 ntBASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 TSPY7P-201ENST00000431358 1114 ntBASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHAC2Q9Y5I4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 TSPY15P-201ENST00000457163 923 ntBASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 AC124016.1-201ENST00000609552 612 ntBASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 AC073912.3-201ENST00000624414 853 ntBASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHAC2Q9Y5I4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDHAC2Q9Y5I4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms