Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHA13Q9Y5I0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 AC012414.1-201ENST00000556676 535 ntBASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 RASA4CP-201ENST00000424092 1398 ntBASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHA13Q9Y5I0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 EDA-201ENST00000338901 1233 ntBASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 AC131212.1-201ENST00000613771 668 ntBASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 AC092720.2-201ENST00000602388 1665 ntBASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHA13Q9Y5I0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHA13Q9Y5I0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 TPRG1LP1-201ENST00000598702 760 ntBASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 AL355001.2-201ENST00000620617 1191 ntBASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHA13Q9Y5I0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 MIR939-201ENST00000401314 82 ntBASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHA13Q9Y5I0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 AF213884.3-201ENST00000563833 479 ntBASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 AC008175.2-201ENST00000612840 297 ntBASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 RARRES2P11-201ENST00000635158 484 ntBASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHA13Q9Y5I0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms