Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 AL162430.1-201ENST00000480705 870 ntBASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LINC00474Q9P2X8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00474Q9P2X8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00474Q9P2X8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00474Q9P2X8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00474Q9P2X8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00474Q9P2X8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC00474Q9P2X8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 AC243732.1-201ENST00000612648 864 ntBASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC00474Q9P2X8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms