Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 AC090192.1-201ENST00000517740 490 ntBASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PNPLA3Q9NST1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PNPLA3Q9NST1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.74
PNPLA3Q9NST1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 AC004911.1-201ENST00000416316 871 ntBASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 AC087239.1-201ENST00000622671 572 ntBASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.64■□□□□ 0.73
PNPLA3Q9NST1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 AC010141.3-201ENST00000456659 717 ntBASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 AC026471.6-201ENST00000622954 1905 ntBASIC19.63■□□□□ 0.73
PNPLA3Q9NST1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PNPLA3Q9NST1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms