Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX6Q8HWS3 GABARAPL3-202ENST00000624044 1851 ntBASIC21.37■■□□□ 1.01
RFX6Q8HWS3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 AC027702.1-201ENST00000563810 1770 ntBASIC21.36■■□□□ 1.01
RFX6Q8HWS3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
RFX6Q8HWS3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 KRT18P20-201ENST00000548986 1279 ntBASIC21.35■■□□□ 1.01
RFX6Q8HWS3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RFX6Q8HWS3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
RFX6Q8HWS3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 KRT18P61-201ENST00000585825 1298 ntBASIC21.33■■□□□ 1.01
RFX6Q8HWS3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX6Q8HWS3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RFX6Q8HWS3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.33■■□□□ 1
RFX6Q8HWS3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFX6Q8HWS3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RFX6Q8HWS3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFX6Q8HWS3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.33■■□□□ 1
RFX6Q8HWS3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.33■■□□□ 1
RFX6Q8HWS3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
RFX6Q8HWS3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.32■■□□□ 1
RFX6Q8HWS3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RFX6Q8HWS3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RFX6Q8HWS3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RFX6Q8HWS3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.32■■□□□ 1
RFX6Q8HWS3 KRT19P1-201ENST00000405746 1186 ntBASIC21.32■■□□□ 1
RFX6Q8HWS3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.32■■□□□ 1
RFX6Q8HWS3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms