Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 UTP22YGR090W 3714 nt2.59□□□□□ -1.99
RPT4P53549 ALK2YBL009W 2031 nt2.59□□□□□ -1.99
RPT4P53549 GCV2YMR189W 3105 nt2.59□□□□□ -1.99
RPT4P53549 YDR115WYDR115W 318 nt2.59□□□□□ -1.99
RPT4P53549 DAD4YDR320C-A 219 nt2.59□□□□□ -1.99
RPT4P53549 RTS3YGR161C 792 nt2.59□□□□□ -1.99
RPT4P53549 YKL123WYKL123W 381 nt2.59□□□□□ -1.99
RPT4P53549 YMR254CYMR254C 309 nt2.59□□□□□ -1.99
RPT4P53549 ESF2YNR054C 951 nt2.59□□□□□ -1.99
RPT4P53549 LCL1YPL056C 306 nt2.59□□□□□ -1.99
RPT4P53549 SUL1YBR294W 2580 nt2.59□□□□□ -1.99
RPT4P53549 DAL5YJR152W 1632 nt2.58□□□□□ -2
RPT4P53549 AIM18YHR198C 966 nt2.58□□□□□ -2
RPT4P53549 YJL119CYJL119C 324 nt2.58□□□□□ -2
RPT4P53549 PRP21YJL203W 843 nt2.58□□□□□ -2
RPT4P53549 YNL150WYNL150W 408 nt2.58□□□□□ -2
RPT4P53549 YNR034W-AYNR034W-A 297 nt2.58□□□□□ -2
RPT4P53549 YOR169CYOR169C 465 nt2.58□□□□□ -2
RPT4P53549 YDR179W-AYDR179W-A 1392 nt2.58□□□□□ -2
RPT4P53549 DNL4YOR005C 2835 nt2.57□□□□□ -2
RPT4P53549 NPR1YNL183C 2373 nt2.57□□□□□ -2
RPT4P53549 YDR461C-AYDR461C-A 243 nt2.57□□□□□ -2
RPT4P53549 PRP38YGR075C 729 nt2.57□□□□□ -2
RPT4P53549 YGR242WYGR242W 309 nt2.57□□□□□ -2
RPT4P53549 NOP19YGR251W 591 nt2.57□□□□□ -2
RPT4P53549 SRP21YKL122C 504 nt2.57□□□□□ -2
RPT4P53549 YPR147CYPR147C 915 nt2.57□□□□□ -2
RPT4P53549 MUD1YBR119W 897 nt2.57□□□□□ -2
RPT4P53549 REV3YPL167C 4515 nt2.56□□□□□ -2
RPT4P53549 NEL1YHR035W 1893 nt2.56□□□□□ -2
RPT4P53549 RPS26BYER131W 360 nt2.56□□□□□ -2
RPT4P53549 YOL029CYOL029C 606 nt2.56□□□□□ -2
RPT4P53549 YOL134CYOL134C 390 nt2.56□□□□□ -2
RPT4P53549 PEP12YOR036W 867 nt2.56□□□□□ -2
RPT4P53549 CSM4YPL200W 471 nt2.56□□□□□ -2
RPT4P53549 snR189snR189 189 nt2.56□□□□□ -2
RPT4P53549 PUF4YGL014W 2667 nt2.56□□□□□ -2
RPT4P53549 ESC1YMR219W 4977 nt2.56□□□□□ -2
RPT4P53549 TFC3YAL001C 3483 nt2.56□□□□□ -2
RPT4P53549 RLF2YPR018W 1821 nt2.56□□□□□ -2
RPT4P53549 YDR239CYDR239C 2364 nt2.56□□□□□ -2
RPT4P53549 SVL3YPL032C 2478 nt2.56□□□□□ -2
RPT4P53549 snR59snR59 78 nt2.55□□□□□ -2
RPT4P53549 TMA20YER007C-A 546 nt2.55□□□□□ -2
RPT4P53549 NPR3YHL023C 3441 nt2.55□□□□□ -2
RPT4P53549 YHR054CYHR054C 1065 nt2.55□□□□□ -2
RPT4P53549 YLR224WYLR224W 1110 nt2.55□□□□□ -2
RPT4P53549 MRPL33YMR286W 261 nt2.55□□□□□ -2
RPT4P53549 COQ10YOL008W 624 nt2.55□□□□□ -2
RPT4P53549 ISU1YPL135W 498 nt2.55□□□□□ -2
RPT4P53549 VID24YBR105C 1089 nt2.55□□□□□ -2
RPT4P53549 YEF3YLR249W 3135 nt2.55□□□□□ -2
RPT4P53549 SDL1YIL167W 633 nt2.54□□□□□ -2
RPT4P53549 YJR087WYJR087W 351 nt2.54□□□□□ -2
RPT4P53549 ATP18YML081C-A 180 nt2.54□□□□□ -2
RPT4P53549 YNR025CYNR025C 360 nt2.54□□□□□ -2
RPT4P53549 YOL159C-AYOL159C-A 273 nt2.54□□□□□ -2
RPT4P53549 TAZ1YPR140W 1146 nt2.54□□□□□ -2
RPT4P53549 SHE4YOR035C 2370 nt2.54□□□□□ -2
RPT4P53549 HRD3YLR207W 2502 nt2.53□□□□□ -2
RPT4P53549 INO80YGL150C 4470 nt2.53□□□□□ -2
RPT4P53549 snR9snR9 187 nt2.53□□□□□ -2
RPT4P53549 NCB2YDR397C 441 nt2.53□□□□□ -2
RPT4P53549 TIF35YDR429C 825 nt2.53□□□□□ -2
RPT4P53549 ACF4YJR083C 930 nt2.53□□□□□ -2
RPT4P53549 ATG38YLR211C 681 nt2.53□□□□□ -2
RPT4P53549 GAL80YML051W 1308 nt2.52□□□□□ -2.01
RPT4P53549 YIL080WYIL080W 4722 nt2.52□□□□□ -2.01
RPT4P53549 snR76snR76 109 nt2.52□□□□□ -2.01
RPT4P53549 YDR018CYDR018C 1191 nt2.52□□□□□ -2.01
RPT4P53549 ADK1YDR226W 669 nt2.52□□□□□ -2.01
RPT4P53549 GPI8YDR331W 1236 nt2.52□□□□□ -2.01
RPT4P53549 YAL042C-AYAL042C-A 378 nt2.52□□□□□ -2.01
RPT4P53549 RPS1AYLR441C 768 nt2.52□□□□□ -2.01
RPT4P53549 RCE1YMR274C 948 nt2.52□□□□□ -2.01
RPT4P53549 YNL303WYNL303W 348 nt2.52□□□□□ -2.01
RPT4P53549 MIX23YBL107C 591 nt2.52□□□□□ -2.01
RPT4P53549 GPI17YDR434W 1605 nt2.52□□□□□ -2.01
RPT4P53549 UBP16YPL072W 1500 nt2.52□□□□□ -2.01
RPT4P53549 KAP123YER110C 3342 nt2.52□□□□□ -2.01
RPT4P53549 PSK2YOL045W 3306 nt2.52□□□□□ -2.01
RPT4P53549 VPS74YDR372C 1038 nt2.51□□□□□ -2.01
RPT4P53549 RPS17BYDR447C 411 nt2.51□□□□□ -2.01
RPT4P53549 MPO1YGL010W 525 nt2.51□□□□□ -2.01
RPT4P53549 YMR144WYMR144W 1029 nt2.51□□□□□ -2.01
RPT4P53549 YOL150CYOL150C 312 nt2.51□□□□□ -2.01
RPT4P53549 RLI1YDR091C 1827 nt2.51□□□□□ -2.01
RPT4P53549 SNF12YNR023W 1701 nt2.51□□□□□ -2.01
RPT4P53549 ISW1YBR245C 3390 nt2.5□□□□□ -2.01
RPT4P53549 TRA1YHR099W 11235 nt2.5□□□□□ -2.01
RPT4P53549 HYP2YEL034W 474 nt2.5□□□□□ -2.01
RPT4P53549 YER189WYER189W 369 nt2.5□□□□□ -2.01
RPT4P53549 VMA21YGR105W 234 nt2.5□□□□□ -2.01
RPT4P53549 OTU2YHL013C 924 nt2.5□□□□□ -2.01
RPT4P53549 TAP42YMR028W 1101 nt2.5□□□□□ -2.01
RPT4P53549 TPS2YDR074W 2691 nt2.5□□□□□ -2.01
RPT4P53549 GPI19YDR437W 423 nt2.49□□□□□ -2.01
RPT4P53549 YGR228WYGR228W 345 nt2.49□□□□□ -2.01
RPT4P53549 YHL006W-AYHL006W-A 354 nt2.49□□□□□ -2.01
RPT4P53549 FYV4YHR059W 393 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 30.9 ms