Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 PEX6YNL329C 3093 nt3.7□□□□□ -1.82
PUB1P32588 SRP72YPL210C 1923 nt3.7□□□□□ -1.82
PUB1P32588 ATG2YNL242W 4779 nt3.7□□□□□ -1.82
PUB1P32588 YLR001CYLR001C 2589 nt3.69□□□□□ -1.82
PUB1P32588 CHL1YPL008W 2586 nt3.69□□□□□ -1.82
PUB1P32588 GAL11YOL051W 3246 nt3.69□□□□□ -1.82 RIP-Chip
PUB1P32588 YER091C-AYER091C-A 222 nt3.69□□□□□ -1.82
PUB1P32588 RPL14BYHL001W 417 nt3.69□□□□□ -1.82
PUB1P32588 YHL042WYHL042W 453 nt3.69□□□□□ -1.82
PUB1P32588 YMR172C-AYMR172C-A 384 nt3.69□□□□□ -1.82
PUB1P32588 YNL010WYNL010W 726 nt3.69□□□□□ -1.82
PUB1P32588 SWD3YBR175W 948 nt3.69□□□□□ -1.82 RIP-Chip
PUB1P32588 SOK2YMR016C 2358 nt3.69□□□□□ -1.82
PUB1P32588 YKL222CYKL222C 2118 nt3.68□□□□□ -1.82
PUB1P32588 STB2YMR053C 2553 nt3.68□□□□□ -1.82
PUB1P32588 FOX2YKR009C 2703 nt3.68□□□□□ -1.82 RIP-Chip
PUB1P32588 MCM2YBL023C 2607 nt3.68□□□□□ -1.82 RIP-Chip
PUB1P32588 HTA1YDR225W 399 nt3.68□□□□□ -1.82 RIP-Chip
PUB1P32588 VPS55YJR044C 423 nt3.68□□□□□ -1.82 RIP-Chip
PUB1P32588 HTB2YBL002W 396 nt3.68□□□□□ -1.82 RIP-Chip
PUB1P32588 FRE4YNR060W 2160 nt3.68□□□□□ -1.82
PUB1P32588 SSB1YDL229W 1842 nt3.67□□□□□ -1.82
PUB1P32588 SRO7YPR032W 3102 nt3.67□□□□□ -1.82
PUB1P32588 SRS2YJL092W 3525 nt3.67□□□□□ -1.82
PUB1P32588 NCR1YPL006W 3513 nt3.67□□□□□ -1.82 RIP-Chip
PUB1P32588 NNK1YKL171W 2787 nt3.67□□□□□ -1.82
PUB1P32588 OLI1Q0130 231 nt3.67□□□□□ -1.82
PUB1P32588 YBL028CYBL028C 321 nt3.67□□□□□ -1.82
PUB1P32588 SYF1YDR416W 2580 nt3.67□□□□□ -1.82
PUB1P32588 ACE2YLR131C 2313 nt3.67□□□□□ -1.82
PUB1P32588 FRT2YAL028W 1587 nt3.67□□□□□ -1.82
PUB1P32588 YDR061WYDR061W 1620 nt3.66□□□□□ -1.82
PUB1P32588 YDL247W-AYDL247W-A 75 nt3.66□□□□□ -1.82 RIP-Chip
PUB1P32588 MZM1YDR493W 372 nt3.66□□□□□ -1.82
PUB1P32588 YJR140W-AYJR140W-A 150 nt3.66□□□□□ -1.82
PUB1P32588 RPL37AYLR185W 267 nt3.66□□□□□ -1.82
PUB1P32588 RPS22BYLR367W 393 nt3.66□□□□□ -1.82 RIP-Chip
PUB1P32588 RPB11YOL005C 363 nt3.66□□□□□ -1.82
PUB1P32588 ATP15YPL271W 189 nt3.66□□□□□ -1.82 RIP-Chip
PUB1P32588 LTP1YPR073C 486 nt3.66□□□□□ -1.82
PUB1P32588 SPC105YGL093W 2754 nt3.66□□□□□ -1.82
PUB1P32588 IRC3YDR332W 2070 nt3.66□□□□□ -1.82
PUB1P32588 RIM20YOR275C 1986 nt3.65□□□□□ -1.82
PUB1P32588 YBR238CYBR238C 2196 nt3.65□□□□□ -1.82 RIP-Chip
PUB1P32588 ARF1YDL192W 546 nt3.65□□□□□ -1.83
PUB1P32588 STE14YDR410C 720 nt3.65□□□□□ -1.83 RIP-Chip
PUB1P32588 CDC26YFR036W 375 nt3.65□□□□□ -1.83
PUB1P32588 ECM22YLR228C 2445 nt3.65□□□□□ -1.83
PUB1P32588 DNM1YLL001W 2274 nt3.65□□□□□ -1.83
PUB1P32588 IKS1YJL057C 2004 nt3.65□□□□□ -1.83
PUB1P32588 UBP12YJL197W 3765 nt3.64□□□□□ -1.83
PUB1P32588 ARG2YJL071W 1725 nt3.64□□□□□ -1.83
PUB1P32588 ATP22YDR350C 2055 nt3.64□□□□□ -1.83
PUB1P32588 YDR250CYDR250C 276 nt3.64□□□□□ -1.83
PUB1P32588 tF(GAA)QtF(GAA)Q 75 nt3.64□□□□□ -1.83
PUB1P32588 RPL29YFR032C-A 180 nt3.64□□□□□ -1.83
PUB1P32588 YLR053CYLR053C 327 nt3.64□□□□□ -1.83
PUB1P32588 SBE2YDR351W 2595 nt3.64□□□□□ -1.83
PUB1P32588 CUL3YGR003W 2235 nt3.64□□□□□ -1.83
PUB1P32588 ULP1YPL020C 1866 nt3.64□□□□□ -1.83
PUB1P32588 EPO1YMR124W 2832 nt3.64□□□□□ -1.83
PUB1P32588 PBS2YJL128C 2007 nt3.63□□□□□ -1.83
PUB1P32588 YDR544CYDR544C 429 nt3.63□□□□□ -1.83
PUB1P32588 TIM8YJR135W-A 264 nt3.63□□□□□ -1.83 RIP-Chip
PUB1P32588 GDH2YDL215C 3279 nt3.63□□□□□ -1.83
PUB1P32588 LRE1YCL051W 1752 nt3.63□□□□□ -1.83
PUB1P32588 PHO2YDL106C 1680 nt3.62□□□□□ -1.83
PUB1P32588 BEM4YPL161C 1902 nt3.62□□□□□ -1.83
PUB1P32588 SIP1YDR422C 2448 nt3.62□□□□□ -1.83 RIP-Chip
PUB1P32588 REB1YBR049C 2433 nt3.62□□□□□ -1.83
PUB1P32588 MSK1YNL073W 1731 nt3.62□□□□□ -1.83
PUB1P32588 DPB11YJL090C 2295 nt3.62□□□□□ -1.83
PUB1P32588 YDL011CYDL011C 324 nt3.62□□□□□ -1.83
PUB1P32588 RPS26BYER131W 360 nt3.62□□□□□ -1.83 RIP-Chip
PUB1P32588 tL(UAG)JtL(UAG)J 82 nt3.62□□□□□ -1.83
PUB1P32588 tL(UAG)L1tL(UAG)L1 82 nt3.62□□□□□ -1.83
PUB1P32588 tL(UAG)L2tL(UAG)L2 82 nt3.62□□□□□ -1.83
PUB1P32588 CYB5YNL111C 363 nt3.62□□□□□ -1.83 RIP-Chip
PUB1P32588 TIF4631YGR162W 2859 nt3.62□□□□□ -1.83 RIP-Chip
PUB1P32588 RPB2YOR151C 3675 nt3.62□□□□□ -1.83
PUB1P32588 NAN1YPL126W 2691 nt3.62□□□□□ -1.83
PUB1P32588 ELM1YKL048C 1923 nt3.62□□□□□ -1.83
PUB1P32588 PUT2YHR037W 1728 nt3.61□□□□□ -1.83
PUB1P32588 SIN4YNL236W 2925 nt3.61□□□□□ -1.83
PUB1P32588 ATP25YMR098C 1839 nt3.61□□□□□ -1.83
PUB1P32588 MDM32YOR147W 1869 nt3.61□□□□□ -1.83
PUB1P32588 RPS24AYER074W 408 nt3.61□□□□□ -1.83 RIP-Chip
PUB1P32588 RPS23AYGR118W 438 nt3.61□□□□□ -1.83
PUB1P32588 YGR269WYGR269W 327 nt3.61□□□□□ -1.83
PUB1P32588 YMR326CYMR326C 309 nt3.61□□□□□ -1.83
PUB1P32588 BBC1YJL020C 3474 nt3.61□□□□□ -1.83
PUB1P32588 MLH2YLR035C 2088 nt3.6□□□□□ -1.83
PUB1P32588 IGO2YHR132W-A 396 nt3.6□□□□□ -1.83 RIP-Chip
PUB1P32588 YIL071W-AYIL071W-A 477 nt3.6□□□□□ -1.83
PUB1P32588 ASC1YMR116C 960 nt3.6□□□□□ -1.83
PUB1P32588 NUT2YPR168W 474 nt3.6□□□□□ -1.83
PUB1P32588 RPO31YOR116C 4383 nt3.6□□□□□ -1.83
PUB1P32588 RPO21YDL140C 5202 nt3.6□□□□□ -1.83
PUB1P32588 YNR065CYNR065C 3351 nt3.59□□□□□ -1.83 RIP-Chip
PUB1P32588 SSP1YHR184W 1716 nt3.59□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms