Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 YCR013CYCR013C 648 nt2.34□□□□□ -2.03
SHE3P38272 KEI1YDR367W 666 nt2.34□□□□□ -2.03
SHE3P38272 RPS24AYER074W 408 nt2.34□□□□□ -2.03
SHE3P38272 MIC19YFR011C 513 nt2.34□□□□□ -2.03
SHE3P38272 YIR020C-BYIR020C-B 735 nt2.34□□□□□ -2.03
SHE3P38272 CDC123YLR215C 1083 nt2.34□□□□□ -2.03
SHE3P38272 CWC24YLR323C 780 nt2.34□□□□□ -2.03
SHE3P38272 ICY1YMR195W 384 nt2.34□□□□□ -2.03
SHE3P38272 ORC2YBR060C 1863 nt2.34□□□□□ -2.03
SHE3P38272 SSD1YDR293C 3753 nt2.34□□□□□ -2.04
SHE3P38272 AI2Q0055 2565 nt2.34□□□□□ -2.04
SHE3P38272 TMA64YDR117C 1698 nt2.34□□□□□ -2.04
SHE3P38272 HFM1YGL251C 3564 nt2.34□□□□□ -2.04
SHE3P38272 YEF3YLR249W 3135 nt2.33□□□□□ -2.04
SHE3P38272 RLI1YDR091C 1827 nt2.33□□□□□ -2.04
SHE3P38272 ARK1YNL020C 1917 nt2.33□□□□□ -2.04
SHE3P38272 YCR090CYCR090C 549 nt2.33□□□□□ -2.04
SHE3P38272 YFL012W-AYFL012W-A 375 nt2.33□□□□□ -2.04
SHE3P38272 GIM5YML094W 492 nt2.33□□□□□ -2.04
SHE3P38272 PAI3YMR174C 207 nt2.33□□□□□ -2.04
SHE3P38272 YPR014CYPR014C 330 nt2.33□□□□□ -2.04
SHE3P38272 ALG14YBR070C 714 nt2.33□□□□□ -2.04
SHE3P38272 YIL080WYIL080W 4722 nt2.33□□□□□ -2.04
SHE3P38272 SPB1YCL054W 2526 nt2.33□□□□□ -2.04
SHE3P38272 STI1YOR027W 1770 nt2.33□□□□□ -2.04
SHE3P38272 SSY1YDR160W 2559 nt2.33□□□□□ -2.04
SHE3P38272 MAL33YBR297W 1407 nt2.33□□□□□ -2.04
SHE3P38272 EAP1YKL204W 1899 nt2.33□□□□□ -2.04
SHE3P38272 21S_rRNA21S_rRNA 3296 nt2.32□□□□□ -2.04
SHE3P38272 SRB4YER022W 2064 nt2.32□□□□□ -2.04
SHE3P38272 15S_rRNA15S_rRNA 1649 nt2.32□□□□□ -2.04
SHE3P38272 KHA1YJL094C 2622 nt2.32□□□□□ -2.04
SHE3P38272 PHO2YDL106C 1680 nt2.32□□□□□ -2.04
SHE3P38272 PBP4YDL053C 558 nt2.32□□□□□ -2.04
SHE3P38272 YGR226CYGR226C 210 nt2.32□□□□□ -2.04
SHE3P38272 YJL119CYJL119C 324 nt2.32□□□□□ -2.04
SHE3P38272 VPS51YKR020W 495 nt2.32□□□□□ -2.04
SHE3P38272 VMA6YLR447C 1038 nt2.32□□□□□ -2.04
SHE3P38272 IRC21YMR073C 606 nt2.32□□□□□ -2.04
SHE3P38272 ERG29YMR134W 714 nt2.32□□□□□ -2.04
SHE3P38272 RPS16AYMR143W 432 nt2.32□□□□□ -2.04
SHE3P38272 YMR194C-AYMR194C-A 225 nt2.32□□□□□ -2.04
SHE3P38272 YPL142CYPL142C 318 nt2.32□□□□□ -2.04
SHE3P38272 MBA1YBR185C 837 nt2.32□□□□□ -2.04
SHE3P38272 SAK1YER129W 3429 nt2.32□□□□□ -2.04
SHE3P38272 YDR261W-BYDR261W-B 5313 nt2.32□□□□□ -2.04
SHE3P38272 YFL002W-AYFL002W-A 5313 nt2.32□□□□□ -2.04
SHE3P38272 YGR161W-BYGR161W-B 5313 nt2.32□□□□□ -2.04
SHE3P38272 YCL019WYCL019W 5313 nt2.32□□□□□ -2.04
SHE3P38272 ASI3YNL008C 2031 nt2.31□□□□□ -2.04
SHE3P38272 KTI11YBL071W-A 249 nt2.31□□□□□ -2.04
SHE3P38272 YBR062CYBR062C 543 nt2.31□□□□□ -2.04
SHE3P38272 MUD1YBR119W 897 nt2.31□□□□□ -2.04
SHE3P38272 UTP15YMR093W 1542 nt2.31□□□□□ -2.04
SHE3P38272 UTP22YGR090W 3714 nt2.31□□□□□ -2.04
SHE3P38272 BIT61YJL058C 1632 nt2.31□□□□□ -2.04
SHE3P38272 YNL193WYNL193W 1677 nt2.31□□□□□ -2.04
SHE3P38272 JJJ2YJL162C 1752 nt2.31□□□□□ -2.04
SHE3P38272 VHR1YIL056W 1923 nt2.3□□□□□ -2.04
SHE3P38272 SSN2YDR443C 4263 nt2.3□□□□□ -2.04
SHE3P38272 YDR115WYDR115W 318 nt2.3□□□□□ -2.04
SHE3P38272 GCN4YEL009C 846 nt2.3□□□□□ -2.04
SHE3P38272 PRP21YJL203W 843 nt2.3□□□□□ -2.04
SHE3P38272 RBL2YOR265W 321 nt2.3□□□□□ -2.04
SHE3P38272 ATP3YBR039W 936 nt2.3□□□□□ -2.04
SHE3P38272 MSS18YPR134W 807 nt2.3□□□□□ -2.04
SHE3P38272 YPR170CYPR170C 336 nt2.3□□□□□ -2.04
SHE3P38272 UBX3YDL091C 1368 nt2.3□□□□□ -2.04
SHE3P38272 SHS1YDL225W 1656 nt2.3□□□□□ -2.04
SHE3P38272 PCK1YKR097W 1650 nt2.3□□□□□ -2.04
SHE3P38272 YKR078WYKR078W 1758 nt2.3□□□□□ -2.04
SHE3P38272 BOI1YBL085W 2943 nt2.3□□□□□ -2.04
SHE3P38272 SSQ1YLR369W 1974 nt2.29□□□□□ -2.04
SHE3P38272 YIL012WYIL012W 342 nt2.29□□□□□ -2.04
SHE3P38272 RPS22BYLR367W 393 nt2.29□□□□□ -2.04
SHE3P38272 YMR181CYMR181C 465 nt2.29□□□□□ -2.04
SHE3P38272 HEM4YOR278W 828 nt2.29□□□□□ -2.04
SHE3P38272 DGK1YOR311C 873 nt2.29□□□□□ -2.04
SHE3P38272 YPR153WYPR153W 423 nt2.29□□□□□ -2.04
SHE3P38272 KOG1YHR186C 4674 nt2.29□□□□□ -2.04
SHE3P38272 SUL1YBR294W 2580 nt2.29□□□□□ -2.04
SHE3P38272 CLN3YAL040C 1743 nt2.28□□□□□ -2.04
SHE3P38272 SPF1YEL031W 3648 nt2.28□□□□□ -2.04
SHE3P38272 NCS2YNL119W 1482 nt2.28□□□□□ -2.04
SHE3P38272 YDR018CYDR018C 1191 nt2.28□□□□□ -2.04
SHE3P38272 NCB2YDR397C 441 nt2.28□□□□□ -2.04
SHE3P38272 TDA2YER071C 381 nt2.28□□□□□ -2.04
SHE3P38272 SDL1YIL167W 633 nt2.28□□□□□ -2.04
SHE3P38272 YJR087WYJR087W 351 nt2.28□□□□□ -2.04
SHE3P38272 PDP3YLR455W 915 nt2.28□□□□□ -2.04
SHE3P38272 SAS2YMR127C 1017 nt2.28□□□□□ -2.04
SHE3P38272 NGL1YOL042W 1092 nt2.28□□□□□ -2.04
SHE3P38272 YCL023CYCL023C 348 nt2.28□□□□□ -2.04
SHE3P38272 ATP22YDR350C 2055 nt2.28□□□□□ -2.04
SHE3P38272 SSE1YPL106C 2082 nt2.28□□□□□ -2.04
SHE3P38272 FAR11YNL127W 2862 nt2.27□□□□□ -2.05
SHE3P38272 DNL4YOR005C 2835 nt2.27□□□□□ -2.05
SHE3P38272 DAD1YDR016C 285 nt2.27□□□□□ -2.05
SHE3P38272 BRP1YGL007W 378 nt2.27□□□□□ -2.05
SHE3P38272 YHL006W-AYHL006W-A 354 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms