Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 AAD3YCR107W 1092 nt4.08□□□□□ -1.76
VPS35P34110 UBP5YER144C 2418 nt4.08□□□□□ -1.76
VPS35P34110 YHR139C-AYHR139C-A 312 nt4.08□□□□□ -1.76
VPS35P34110 YJR003CYJR003C 1560 nt4.08□□□□□ -1.76
VPS35P34110 SWT1YOR166C 1377 nt4.08□□□□□ -1.76
VPS35P34110 ECM16YMR128W 3804 nt4.08□□□□□ -1.76
VPS35P34110 ROD1YOR018W 2514 nt4.07□□□□□ -1.76
VPS35P34110 MED1YPR070W 1701 nt4.07□□□□□ -1.76
VPS35P34110 CIN1YOR349W 3045 nt4.07□□□□□ -1.76
VPS35P34110 ATP17YDR377W 306 nt4.07□□□□□ -1.76
VPS35P34110 YEL032C-AYEL032C-A 162 nt4.07□□□□□ -1.76
VPS35P34110 YIL012WYIL012W 342 nt4.07□□□□□ -1.76
VPS35P34110 YJR112W-AYJR112W-A 330 nt4.07□□□□□ -1.76
VPS35P34110 COX19YLL018C-A 297 nt4.07□□□□□ -1.76
VPS35P34110 PAU23YLR037C 375 nt4.07□□□□□ -1.76
VPS35P34110 YOR146WYOR146W 306 nt4.07□□□□□ -1.76
VPS35P34110 SLM6YBR266C 453 nt4.07□□□□□ -1.76
VPS35P34110 EMC1YCL045C 2283 nt4.07□□□□□ -1.76
VPS35P34110 RPO31YOR116C 4383 nt4.07□□□□□ -1.76
VPS35P34110 LCB5YLR260W 2064 nt4.07□□□□□ -1.76
VPS35P34110 YEL018C-AYEL018C-A 534 nt4.06□□□□□ -1.76
VPS35P34110 ERG28YER044C 447 nt4.06□□□□□ -1.76
VPS35P34110 RAD6YGL058W 519 nt4.06□□□□□ -1.76
VPS35P34110 BCD1YHR040W 1101 nt4.06□□□□□ -1.76
VPS35P34110 FLO10YKR102W 3510 nt4.05□□□□□ -1.76
VPS35P34110 ZDS1YMR273C 2748 nt4.05□□□□□ -1.76
VPS35P34110 ARO1YDR127W 4767 nt4.05□□□□□ -1.76
VPS35P34110 PDX1YGR193C 1233 nt4.05□□□□□ -1.76
VPS35P34110 PET191YJR034W 327 nt4.05□□□□□ -1.76
VPS35P34110 RPS7BYNL096C 573 nt4.05□□□□□ -1.76
VPS35P34110 RPB11YOL005C 363 nt4.05□□□□□ -1.76
VPS35P34110 ATP25YMR098C 1839 nt4.05□□□□□ -1.76
VPS35P34110 YKL100CYKL100C 1764 nt4.04□□□□□ -1.76
VPS35P34110 YGR237CYGR237C 2358 nt4.04□□□□□ -1.76
VPS35P34110 YGL140CYGL140C 3660 nt4.04□□□□□ -1.76
VPS35P34110 KHA1YJL094C 2622 nt4.04□□□□□ -1.76
VPS35P34110 RPL37AYLR185W 267 nt4.04□□□□□ -1.76
VPS35P34110 ATP3YBR039W 936 nt4.04□□□□□ -1.76
VPS35P34110 YPL276WYPL276W 438 nt4.04□□□□□ -1.76
VPS35P34110 SEG1YMR086W 2883 nt4.04□□□□□ -1.76
VPS35P34110 OST1YJL002C 1431 nt4.04□□□□□ -1.76
VPS35P34110 MCM7YBR202W 2538 nt4.03□□□□□ -1.76
VPS35P34110 URB2YJR041C 3525 nt4.03□□□□□ -1.76
VPS35P34110 CCM1YGR150C 2595 nt4.03□□□□□ -1.76
VPS35P34110 HMRA2YCR096C 360 nt4.03□□□□□ -1.76
VPS35P34110 FMP10YER182W 735 nt4.03□□□□□ -1.76
VPS35P34110 RPB9YGL070C 369 nt4.03□□□□□ -1.76
VPS35P34110 NOP19YGR251W 591 nt4.03□□□□□ -1.76
VPS35P34110 YJR023CYJR023C 402 nt4.03□□□□□ -1.76
VPS35P34110 JIP3YLR331C 378 nt4.03□□□□□ -1.76
VPS35P34110 RSM19YNR037C 276 nt4.03□□□□□ -1.76
VPS35P34110 MCD4YKL165C 2760 nt4.03□□□□□ -1.76
VPS35P34110 21S_rRNA21S_rRNA 3296 nt4.03□□□□□ -1.76
VPS35P34110 FAA2YER015W 2235 nt4.03□□□□□ -1.76
VPS35P34110 MSD1YPL104W 1977 nt4.03□□□□□ -1.76
VPS35P34110 DPB11YJL090C 2295 nt4.02□□□□□ -1.77
VPS35P34110 FAT1YBR041W 2010 nt4.02□□□□□ -1.77
VPS35P34110 snR8snR8 190 nt4.02□□□□□ -1.77
VPS35P34110 YIR040CYIR040C 333 nt4.02□□□□□ -1.77
VPS35P34110 RPS21BYJL136C 264 nt4.02□□□□□ -1.77
VPS35P34110 YLR154W-BYLR154W-B 165 nt4.02□□□□□ -1.77
VPS35P34110 YBL108WYBL108W 306 nt4.02□□□□□ -1.77
VPS35P34110 HEM4YOR278W 828 nt4.02□□□□□ -1.77
VPS35P34110 ROX1YPR065W 1107 nt4.02□□□□□ -1.77
VPS35P34110 ATP22YDR350C 2055 nt4.02□□□□□ -1.77
VPS35P34110 YDL180WYDL180W 1644 nt4.02□□□□□ -1.77
VPS35P34110 TOP1YOL006C 2310 nt4.01□□□□□ -1.77
VPS35P34110 ARK1YNL020C 1917 nt4.01□□□□□ -1.77
VPS35P34110 ERB1YMR049C 2424 nt4.01□□□□□ -1.77
VPS35P34110 SPC72YAL047C 1869 nt4.01□□□□□ -1.77
VPS35P34110 MDM32YOR147W 1869 nt4.01□□□□□ -1.77
VPS35P34110 RDS1YCR106W 2499 nt4□□□□□ -1.77
VPS35P34110 SWH1YAR042W 3567 nt4□□□□□ -1.77
VPS35P34110 MRH1YDR033W 963 nt4□□□□□ -1.77
VPS35P34110 IRC4YDR540C 540 nt4□□□□□ -1.77
VPS35P34110 YER076W-AYER076W-A 348 nt4□□□□□ -1.77
VPS35P34110 YGR107WYGR107W 450 nt4□□□□□ -1.77
VPS35P34110 YAR029WYAR029W 225 nt4□□□□□ -1.77
VPS35P34110 NUP60YAR002W 1620 nt3.99□□□□□ -1.77
VPS35P34110 XRS2YDR369C 2565 nt3.99□□□□□ -1.77
VPS35P34110 GCD10YNL062C 1437 nt3.99□□□□□ -1.77
VPS35P34110 GPI8YDR331W 1236 nt3.99□□□□□ -1.77
VPS35P34110 TIF35YDR429C 825 nt3.99□□□□□ -1.77
VPS35P34110 YGR051CYGR051C 324 nt3.99□□□□□ -1.77
VPS35P34110 RPC10YHR143W-A 213 nt3.99□□□□□ -1.77
VPS35P34110 YKL111CYKL111C 336 nt3.99□□□□□ -1.77
VPS35P34110 TMA108YIL137C 2841 nt3.99□□□□□ -1.77
VPS35P34110 GYL1YMR192W 2163 nt3.99□□□□□ -1.77
VPS35P34110 YSW1YBR148W 1830 nt3.98□□□□□ -1.77
VPS35P34110 VPS53YJL029C 2469 nt3.98□□□□□ -1.77
VPS35P34110 ELM1YKL048C 1923 nt3.98□□□□□ -1.77
VPS35P34110 YDR102CYDR102C 333 nt3.98□□□□□ -1.77
VPS35P34110 YER066C-AYER066C-A 501 nt3.98□□□□□ -1.77
VPS35P34110 MCM22YJR135C 720 nt3.98□□□□□ -1.77
VPS35P34110 TIM18YOR297C 579 nt3.98□□□□□ -1.77
VPS35P34110 LRG1YDL240W 3054 nt3.98□□□□□ -1.77
VPS35P34110 IOC2YLR095C 2439 nt3.97□□□□□ -1.77
VPS35P34110 TAF6YGL112C 1551 nt3.97□□□□□ -1.77
VPS35P34110 XRN1YGL173C 4587 nt3.97□□□□□ -1.77
VPS35P34110 HFM1YGL251C 3564 nt3.97□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 74.1 ms