Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DUX4L6-201ENST00000626483 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4L1-201ENST00000627662 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4L8-201ENST00000629013 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4L3-201ENST00000630187 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4L7-201ENST00000630678 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4L5-201ENST00000630834 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.84■□□□□ 0.45
SFTPBP07988 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SFTPBP07988 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SFTPBP07988 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SFTPBP07988 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SFTPBP07988 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SFTPBP07988 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SFTPBP07988 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SFTPBP07988 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SFTPBP07988 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SFTPBP07988 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SFTPBP07988 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SFTPBP07988 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SFTPBP07988 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.83■□□□□ 0.44
SFTPBP07988 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.83■□□□□ 0.44
SFTPBP07988 CCDC92B-201ENST00000575506 885 ntBASIC17.83■□□□□ 0.44
SFTPBP07988 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.83■□□□□ 0.44
SFTPBP07988 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SFTPBP07988 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SFTPBP07988 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SFTPBP07988 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.83■□□□□ 0.44
SFTPBP07988 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SFTPBP07988 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.83■□□□□ 0.44
SFTPBP07988 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SFTPBP07988 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SFTPBP07988 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.82■□□□□ 0.44
SFTPBP07988 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 LINC02228-203ENST00000641970 1355 ntBASIC17.82■□□□□ 0.44
SFTPBP07988 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.82■□□□□ 0.44
SFTPBP07988 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.82■□□□□ 0.44
SFTPBP07988 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SFTPBP07988 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.82■□□□□ 0.44
SFTPBP07988 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.82■□□□□ 0.44
SFTPBP07988 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SFTPBP07988 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SFTPBP07988 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SFTPBP07988 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SFTPBP07988 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.81■□□□□ 0.44
SFTPBP07988 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SFTPBP07988 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.81■□□□□ 0.44
SFTPBP07988 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.81■□□□□ 0.44
SFTPBP07988 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SFTPBP07988 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.81■□□□□ 0.44
SFTPBP07988 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.8■□□□□ 0.44
SFTPBP07988 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SFTPBP07988 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.8■□□□□ 0.44
SFTPBP07988 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.8■□□□□ 0.44
SFTPBP07988 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SFTPBP07988 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.8■□□□□ 0.44
SFTPBP07988 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.8■□□□□ 0.44
SFTPBP07988 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SFTPBP07988 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
SFTPBP07988 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SFTPBP07988 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms