Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 AC128676.1-201ENST00000454392 318 ntBASIC20.1■□□□□ 0.81
THSD1Q9NS62 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 AP006587.3-201ENST00000525742 1516 ntBASIC20.1■□□□□ 0.81
THSD1Q9NS62 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
THSD1Q9NS62 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
THSD1Q9NS62 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 POU5F1P4-201ENST00000413175 1085 ntBASIC20.09■□□□□ 0.81
THSD1Q9NS62 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.09■□□□□ 0.81
THSD1Q9NS62 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
THSD1Q9NS62 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
THSD1Q9NS62 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
THSD1Q9NS62 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.08■□□□□ 0.81
THSD1Q9NS62 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.08■□□□□ 0.81
THSD1Q9NS62 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.08■□□□□ 0.81
THSD1Q9NS62 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.08■□□□□ 0.81
THSD1Q9NS62 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THSD1Q9NS62 AL591742.1-201ENST00000604433 565 ntBASIC20.08■□□□□ 0.81
THSD1Q9NS62 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.08■□□□□ 0.81
THSD1Q9NS62 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
THSD1Q9NS62 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.08■□□□□ 0.8
THSD1Q9NS62 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.08■□□□□ 0.8
THSD1Q9NS62 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.08■□□□□ 0.8
THSD1Q9NS62 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 AC010980.2-201ENST00000587099 1412 ntBASIC20.07■□□□□ 0.8
THSD1Q9NS62 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.07■□□□□ 0.8
THSD1Q9NS62 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
THSD1Q9NS62 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 UNC93B4-201ENST00000505679 747 ntBASIC20.06■□□□□ 0.8
THSD1Q9NS62 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
THSD1Q9NS62 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THSD1Q9NS62 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
THSD1Q9NS62 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THSD1Q9NS62 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.05■□□□□ 0.8
THSD1Q9NS62 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THSD1Q9NS62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms