Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 MSB2YGR014W 3921 nt3.04□□□□□ -1.92
SUB1P54000 ESC1YMR219W 4977 nt3.03□□□□□ -1.92
SUB1P54000 PXR1YGR280C 816 nt3.03□□□□□ -1.92
SUB1P54000 AIM26YKL037W 357 nt3.03□□□□□ -1.92
SUB1P54000 PAU8YAL068C 363 nt3.03□□□□□ -1.92
SUB1P54000 YMR187CYMR187C 1296 nt3.03□□□□□ -1.92
SUB1P54000 PAU20YOL161C 363 nt3.03□□□□□ -1.92
SUB1P54000 YPR145C-AYPR145C-A 237 nt3.03□□□□□ -1.92
SUB1P54000 YBR197CYBR197C 654 nt3.03□□□□□ -1.92
SUB1P54000 YBR287WYBR287W 1284 nt3.03□□□□□ -1.92
SUB1P54000 CSF1YLR087C 8877 nt3.03□□□□□ -1.92
SUB1P54000 OSW7YFR039C 1533 nt3.03□□□□□ -1.92
SUB1P54000 PRP31YGR091W 1485 nt3.03□□□□□ -1.93
SUB1P54000 TUS1YLR425W 3924 nt3.02□□□□□ -1.93
SUB1P54000 SNF12YNR023W 1701 nt3.02□□□□□ -1.93
SUB1P54000 GDI1YER136W 1356 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)DtK(UUU)D 73 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)G1tK(UUU)G1 73 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)G2tK(UUU)G2 73 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)KtK(UUU)K 73 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)LtK(UUU)L 73 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)OtK(UUU)O 73 nt3.02□□□□□ -1.93
SUB1P54000 tK(UUU)PtK(UUU)P 73 nt3.02□□□□□ -1.93
SUB1P54000 CAP1YKL007W 807 nt3.02□□□□□ -1.93
SUB1P54000 YLR154W-AYLR154W-A 186 nt3.02□□□□□ -1.93
SUB1P54000 YOR169CYOR169C 465 nt3.02□□□□□ -1.93
SUB1P54000 YOR385WYOR385W 873 nt3.02□□□□□ -1.93
SUB1P54000 CDC20YGL116W 1833 nt3.02□□□□□ -1.93
SUB1P54000 YEF3YLR249W 3135 nt3.02□□□□□ -1.93
SUB1P54000 GYP7YDL234C 2241 nt3.01□□□□□ -1.93
SUB1P54000 PSK2YOL045W 3306 nt3.01□□□□□ -1.93
SUB1P54000 TLC1TLC1 1301 nt3.01□□□□□ -1.93
SUB1P54000 TRM7YBR061C 933 nt3.01□□□□□ -1.93
SUB1P54000 SIR4YDR227W 4077 nt3.01□□□□□ -1.93
SUB1P54000 AKR1YDR264C 2295 nt3.01□□□□□ -1.93
SUB1P54000 KAR9YPL269W 1935 nt3.01□□□□□ -1.93
SUB1P54000 VPS16YPL045W 2397 nt3.01□□□□□ -1.93
SUB1P54000 PRK1YIL095W 2433 nt3□□□□□ -1.93
SUB1P54000 YRR1YOR162C 2433 nt3□□□□□ -1.93
SUB1P54000 TIM9YEL020W-A 264 nt3□□□□□ -1.93
SUB1P54000 YGR293CYGR293C 462 nt3□□□□□ -1.93
SUB1P54000 ILV5YLR355C 1188 nt3□□□□□ -1.93
SUB1P54000 YNR021WYNR021W 1215 nt3□□□□□ -1.93
SUB1P54000 BNR1YIL159W 4128 nt3□□□□□ -1.93
SUB1P54000 15S_rRNA15S_rRNA 1649 nt3□□□□□ -1.93
SUB1P54000 ORC1YML065W 2745 nt2.99□□□□□ -1.93
SUB1P54000 YDR186CYDR186C 2634 nt2.99□□□□□ -1.93
SUB1P54000 NCS2YNL119W 1482 nt2.99□□□□□ -1.93
SUB1P54000 YCR099CYCR099C 468 nt2.99□□□□□ -1.93
SUB1P54000 PBP4YDL053C 558 nt2.99□□□□□ -1.93
SUB1P54000 snR83snR83 306 nt2.99□□□□□ -1.93
SUB1P54000 PEX18YHR160C 852 nt2.99□□□□□ -1.93
SUB1P54000 VPS51YKR020W 495 nt2.99□□□□□ -1.93
SUB1P54000 PAU23YLR037C 375 nt2.99□□□□□ -1.93
SUB1P54000 YGR067CYGR067C 2415 nt2.99□□□□□ -1.93
SUB1P54000 KSP1YHR082C 3090 nt2.99□□□□□ -1.93
SUB1P54000 ECM25YJL201W 1800 nt2.98□□□□□ -1.93
SUB1P54000 ECM29YHL030W 5607 nt2.98□□□□□ -1.93
SUB1P54000 YHL005CYHL005C 393 nt2.98□□□□□ -1.93
SUB1P54000 GRX5YPL059W 453 nt2.98□□□□□ -1.93
SUB1P54000 HFD1YMR110C 1599 nt2.97□□□□□ -1.93
SUB1P54000 YGR109W-AYGR109W-A 873 nt2.97□□□□□ -1.93
SUB1P54000 YIP1YGR172C 747 nt2.97□□□□□ -1.93
SUB1P54000 YIL082WYIL082W 873 nt2.97□□□□□ -1.93
SUB1P54000 YIR020C-BYIR020C-B 735 nt2.97□□□□□ -1.93
SUB1P54000 RPS22AYJL190C 393 nt2.97□□□□□ -1.93
SUB1P54000 RPS17AYML024W 411 nt2.97□□□□□ -1.93
SUB1P54000 SRL4YPL033C 846 nt2.97□□□□□ -1.93
SUB1P54000 NSL1YPL233W 651 nt2.97□□□□□ -1.93
SUB1P54000 GIS1YDR096W 2685 nt2.97□□□□□ -1.93
SUB1P54000 OPI6YDL096C 327 nt2.96□□□□□ -1.94
SUB1P54000 YDR203WYDR203W 318 nt2.96□□□□□ -1.94
SUB1P54000 YOL150CYOL150C 312 nt2.96□□□□□ -1.94
SUB1P54000 BPT1YLL015W 4680 nt2.96□□□□□ -1.94
SUB1P54000 NUM1YDR150W 8247 nt2.95□□□□□ -1.94
SUB1P54000 SNU114YKL173W 3027 nt2.95□□□□□ -1.94
SUB1P54000 YBR277CYBR277C 402 nt2.95□□□□□ -1.94
SUB1P54000 VAC8YEL013W 1737 nt2.94□□□□□ -1.94
SUB1P54000 YOR296WYOR296W 3870 nt2.94□□□□□ -1.94
SUB1P54000 PES4YFR023W 1836 nt2.94□□□□□ -1.94
SUB1P54000 YNL034WYNL034W 1839 nt2.94□□□□□ -1.94
SUB1P54000 ASG1YIL130W 2895 nt2.94□□□□□ -1.94
SUB1P54000 RPS14AYCR031C 414 nt2.94□□□□□ -1.94
SUB1P54000 COX18YGR062C 951 nt2.94□□□□□ -1.94
SUB1P54000 YGR121W-AYGR121W-A 216 nt2.94□□□□□ -1.94
SUB1P54000 GPI14YJR013W 1212 nt2.94□□□□□ -1.94
SUB1P54000 UBP15YMR304W 3693 nt2.94□□□□□ -1.94
SUB1P54000 STE6YKL209C 3873 nt2.94□□□□□ -1.94
SUB1P54000 YBL039W-BYBL039W-B 180 nt2.93□□□□□ -1.94
SUB1P54000 YNL179CYNL179C 438 nt2.93□□□□□ -1.94
SUB1P54000 RIO2YNL207W 1278 nt2.93□□□□□ -1.94
SUB1P54000 AFI1YOR129C 2682 nt2.93□□□□□ -1.94
SUB1P54000 YFL002W-BYFL002W-B 1317 nt2.93□□□□□ -1.94
SUB1P54000 YGR161W-AYGR161W-A 1317 nt2.93□□□□□ -1.94
SUB1P54000 YBL100W-AYBL100W-A 1317 nt2.93□□□□□ -1.94
SUB1P54000 YCL020WYCL020W 1317 nt2.93□□□□□ -1.94
SUB1P54000 RPN3YER021W 1572 nt2.92□□□□□ -1.94
SUB1P54000 SHE4YOR035C 2370 nt2.92□□□□□ -1.94
SUB1P54000 snR59snR59 78 nt2.92□□□□□ -1.94
SUB1P54000 DTD1YDL219W 453 nt2.92□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 38.6 ms