Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 GPI1YGR216C 1830 nt3.8□□□□□ -1.8
DEF1P35732 IGO2YHR132W-A 396 nt3.8□□□□□ -1.8
DEF1P35732 YKL162C-AYKL162C-A 153 nt3.8□□□□□ -1.8
DEF1P35732 MRPL38YKL170W 417 nt3.8□□□□□ -1.8
DEF1P35732 SHH3YMR118C 591 nt3.8□□□□□ -1.8
DEF1P35732 PHO88YBR106W 567 nt3.8□□□□□ -1.8
DEF1P35732 TSC11YER093C 4293 nt3.8□□□□□ -1.8
DEF1P35732 POL4YCR014C 1749 nt3.8□□□□□ -1.8
DEF1P35732 URA2YJL130C 6645 nt3.8□□□□□ -1.8
DEF1P35732 YNR065CYNR065C 3351 nt3.8□□□□□ -1.8
DEF1P35732 CWH43YCR017C 2862 nt3.8□□□□□ -1.8
DEF1P35732 BUD6YLR319C 2367 nt3.8□□□□□ -1.8
DEF1P35732 TGL3YMR313C 1929 nt3.8□□□□□ -1.8
DEF1P35732 SSF1YHR066W 1362 nt3.79□□□□□ -1.8
DEF1P35732 CPR5YDR304C 678 nt3.79□□□□□ -1.8
DEF1P35732 SDH7YDR511W 402 nt3.79□□□□□ -1.8
DEF1P35732 YFL032WYFL032W 321 nt3.79□□□□□ -1.8
DEF1P35732 RDN58-1RDN58-1 158 nt3.79□□□□□ -1.8
DEF1P35732 RDN58-2RDN58-2 158 nt3.79□□□□□ -1.8
DEF1P35732 YBL039W-BYBL039W-B 180 nt3.79□□□□□ -1.8
DEF1P35732 TAF1YGR274C 3201 nt3.78□□□□□ -1.8
DEF1P35732 SSM4YIL030C 3960 nt3.78□□□□□ -1.8
DEF1P35732 YDR230WYDR230W 348 nt3.78□□□□□ -1.8
DEF1P35732 RTR2YDR066C 591 nt3.77□□□□□ -1.81
DEF1P35732 OTU1YFL044C 906 nt3.77□□□□□ -1.81
DEF1P35732 YFR010W-AYFR010W-A 189 nt3.77□□□□□ -1.81
DEF1P35732 YGR053CYGR053C 852 nt3.77□□□□□ -1.81
DEF1P35732 YAL037WYAL037W 804 nt3.77□□□□□ -1.81
DEF1P35732 YMR290W-AYMR290W-A 348 nt3.77□□□□□ -1.81
DEF1P35732 YPL276WYPL276W 438 nt3.77□□□□□ -1.81
DEF1P35732 YPR039WYPR039W 336 nt3.77□□□□□ -1.81
DEF1P35732 GNT1YOR320C 1476 nt3.77□□□□□ -1.81
DEF1P35732 BI4Q0120 1917 nt3.77□□□□□ -1.81
DEF1P35732 OSH6YKR003W 1347 nt3.76□□□□□ -1.81
DEF1P35732 SHS1YDL225W 1656 nt3.76□□□□□ -1.81
DEF1P35732 SRD1YCR018C 666 nt3.76□□□□□ -1.81
DEF1P35732 FAP7YDL166C 594 nt3.76□□□□□ -1.81
DEF1P35732 YER107W-AYER107W-A 321 nt3.76□□□□□ -1.81
DEF1P35732 YHR007C-AYHR007C-A 216 nt3.76□□□□□ -1.81
DEF1P35732 PCL5YHR071W 690 nt3.76□□□□□ -1.81
DEF1P35732 EPT1YHR123W 1176 nt3.76□□□□□ -1.81
DEF1P35732 ICY1YMR195W 384 nt3.76□□□□□ -1.81
DEF1P35732 ATP3YBR039W 936 nt3.76□□□□□ -1.81
DEF1P35732 PRP3YDR473C 1410 nt3.76□□□□□ -1.81
DEF1P35732 YBR225WYBR225W 2703 nt3.76□□□□□ -1.81
DEF1P35732 YEL025CYEL025C 3567 nt3.76□□□□□ -1.81
DEF1P35732 YGL152CYGL152C 678 nt3.75□□□□□ -1.81
DEF1P35732 YGR069WYGR069W 336 nt3.75□□□□□ -1.81
DEF1P35732 VOA1YGR106C 798 nt3.75□□□□□ -1.81
DEF1P35732 TCD1YHR003C 1290 nt3.75□□□□□ -1.81
DEF1P35732 RPS24BYIL069C 408 nt3.75□□□□□ -1.81
DEF1P35732 RMP1YLR145W 606 nt3.75□□□□□ -1.81
DEF1P35732 VTI1YMR197C 654 nt3.75□□□□□ -1.81
DEF1P35732 RPC40YPR110C 1008 nt3.75□□□□□ -1.81
DEF1P35732 MBA1YBR185C 837 nt3.75□□□□□ -1.81
DEF1P35732 RRP5YMR229C 5190 nt3.75□□□□□ -1.81
DEF1P35732 SLK19YOR195W 2466 nt3.75□□□□□ -1.81
DEF1P35732 FRE2YKL220C 2136 nt3.74□□□□□ -1.81
DEF1P35732 CCM1YGR150C 2595 nt3.74□□□□□ -1.81
DEF1P35732 GPI17YDR434W 1605 nt3.74□□□□□ -1.81
DEF1P35732 ROD1YOR018W 2514 nt3.74□□□□□ -1.81
DEF1P35732 YCR045W-AYCR045W-A 351 nt3.74□□□□□ -1.81
DEF1P35732 RMT2YDR465C 1239 nt3.74□□□□□ -1.81
DEF1P35732 RPS23AYGR118W 438 nt3.74□□□□□ -1.81
DEF1P35732 ZEO1YOL109W 342 nt3.74□□□□□ -1.81
DEF1P35732 ERP4YOR016C 624 nt3.74□□□□□ -1.81
DEF1P35732 YOR082CYOR082C 342 nt3.74□□□□□ -1.81
DEF1P35732 RPS23BYPR132W 438 nt3.74□□□□□ -1.81
DEF1P35732 NDC80YIL144W 2076 nt3.74□□□□□ -1.81
DEF1P35732 IRC2YDR112W 309 nt3.73□□□□□ -1.81
DEF1P35732 YGR107WYGR107W 450 nt3.73□□□□□ -1.81
DEF1P35732 IMP4YNL075W 873 nt3.73□□□□□ -1.81
DEF1P35732 SIL1YOL031C 1266 nt3.73□□□□□ -1.81
DEF1P35732 YOR192C-CYOR192C-C 237 nt3.73□□□□□ -1.81
DEF1P35732 RSN1YMR266W 2862 nt3.73□□□□□ -1.81
DEF1P35732 TCB3YML072C 4638 nt3.72□□□□□ -1.81
DEF1P35732 KAR9YPL269W 1935 nt3.72□□□□□ -1.81
DEF1P35732 YDL009CYDL009C 324 nt3.72□□□□□ -1.81
DEF1P35732 TEN1YLR010C 483 nt3.72□□□□□ -1.81
DEF1P35732 YLR230WYLR230W 306 nt3.72□□□□□ -1.81
DEF1P35732 PEX11YOL147C 711 nt3.72□□□□□ -1.81
DEF1P35732 snR36snR36 182 nt3.72□□□□□ -1.81
DEF1P35732 YBR242WYBR242W 717 nt3.72□□□□□ -1.81
DEF1P35732 XRN1YGL173C 4587 nt3.71□□□□□ -1.81
DEF1P35732 OPI6YDL096C 327 nt3.71□□□□□ -1.82
DEF1P35732 YDR102CYDR102C 333 nt3.71□□□□□ -1.82
DEF1P35732 SMX2YFL017W-A 234 nt3.71□□□□□ -1.82
DEF1P35732 YJL086CYJL086C 369 nt3.71□□□□□ -1.82
DEF1P35732 YNL146C-AYNL146C-A 195 nt3.71□□□□□ -1.82
DEF1P35732 TIM18YOR297C 579 nt3.71□□□□□ -1.82
DEF1P35732 CSR2YPR030W 3366 nt3.71□□□□□ -1.82
DEF1P35732 YDR090CYDR090C 933 nt3.7□□□□□ -1.82
DEF1P35732 YER038W-AYER038W-A 381 nt3.7□□□□□ -1.82
DEF1P35732 SUP56tL(CAA)A 82 nt3.7□□□□□ -1.82
DEF1P35732 SUP53tL(CAA)C 82 nt3.7□□□□□ -1.82
DEF1P35732 tL(CAA)DtL(CAA)D 82 nt3.7□□□□□ -1.82
DEF1P35732 tL(CAA)G1tL(CAA)G1 82 nt3.7□□□□□ -1.82
DEF1P35732 SUP54tL(CAA)G2 82 nt3.7□□□□□ -1.82
DEF1P35732 tL(CAA)G3tL(CAA)G3 82 nt3.7□□□□□ -1.82
DEF1P35732 tL(CAA)KtL(CAA)K 82 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms