Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 HMF1YER057C 390 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 SPR6YER115C 576 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 SGN1YIR001C 753 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 EFB1YAL003W 621 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 SSP120YLR250W 705 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 SSN8YNL025C 972 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 PGA1YNL158W 597 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 RED1YLR263W 2484 nt3.93□□□□□ -1.78
TY1A-ER1P0CX71 ALY1YKR021W 2748 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 YDR133CYDR133C 336 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 YDR406W-AYDR406W-A 246 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 YJR140W-AYJR140W-A 150 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 YKL111CYKL111C 336 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 HCH1YNL281W 462 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 RPB11YOL005C 363 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 EGT2YNL327W 3126 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 FUN12YAL035W 3009 nt3.92□□□□□ -1.78
TY1A-ER1P0CX71 PEP5YMR231W 3090 nt3.91□□□□□ -1.78
TY1A-ER1P0CX71 RAD27YKL113C 1149 nt3.91□□□□□ -1.78
TY1A-ER1P0CX71 SSH4YKL124W 1740 nt3.91□□□□□ -1.78
TY1A-ER1P0CX71 JJJ2YJL162C 1752 nt3.91□□□□□ -1.78
TY1A-ER1P0CX71 RPG1YBR079C 2895 nt3.9□□□□□ -1.78
TY1A-ER1P0CX71 CYC7YEL039C 342 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 YFL063WYFL063W 456 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 HYR1YIR037W 492 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 YJR023CYJR023C 402 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 PRE8YML092C 753 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 TVP18YMR071C 504 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 YPL238CYPL238C 390 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 YBP1YBR216C 2025 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 SEC6YIL068C 2418 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 ECM22YLR228C 2445 nt3.9□□□□□ -1.79
TY1A-ER1P0CX71 VMA1YDL185W 3216 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 IZH3YLR023C 1632 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 YDR089WYDR089W 2610 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 TIF35YDR429C 825 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 IRC4YDR540C 540 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 YGL188C-AYGL188C-A 141 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 RPC10YHR143W-A 213 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 YAL004WYAL004W 648 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 YKL156C-AYKL156C-A 117 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 SUI1YNL244C 327 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 YOR200WYOR200W 399 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 BAR1YIL015W 1764 nt3.89□□□□□ -1.79
TY1A-ER1P0CX71 MDM32YOR147W 1869 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 YEL018C-AYEL018C-A 534 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 BCD1YHR040W 1101 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 YAL047W-AYAL047W-A 330 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 IRC23YOR044W 474 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 snR51snR51 107 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 VID27YNL212W 2349 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 SNX41YDR425W 1878 nt3.88□□□□□ -1.79
TY1A-ER1P0CX71 SLM2YNL047C 1971 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 DPB11YJL090C 2295 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 SMI1YGR229C 1518 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 VPS29YHR012W 849 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 YNL198CYNL198C 303 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 YPL229WYPL229W 621 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 YPR099CYPR099C 357 nt3.87□□□□□ -1.79
TY1A-ER1P0CX71 SLP1YOR154W 1764 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 YDR169C-AYDR169C-A 150 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 SMT3YDR510W 306 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 YER079C-AYER079C-A 339 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 YER188C-AYER188C-A 300 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 NSG1YHR133C 876 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 RPL9BYNL067W 576 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 PHO8YDR481C 1701 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 SNF2YOR290C 5112 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 SWI1YPL016W 3945 nt3.86□□□□□ -1.79
TY1A-ER1P0CX71 UBP5YER144C 2418 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 SRO7YPR032W 3102 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 RPL30YGL030W 318 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 YGL088WYGL088W 366 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 YBL006W-AYBL006W-A 150 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 YSH1YLR277C 2340 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 VID28YIL017C 2766 nt3.85□□□□□ -1.79
TY1A-ER1P0CX71 CCT7YJL111W 1653 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 CWC22YGR278W 1734 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 IRC10YOL015W 1761 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 YDR250CYDR250C 276 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 WIP1YDR374W-A 270 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 AIM11YER093C-A 414 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 FMP10YER182W 735 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 YFR056CYFR056C 369 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 ACE2YLR131C 2313 nt3.84□□□□□ -1.79
TY1A-ER1P0CX71 YKL050CYKL050C 2769 nt3.84□□□□□ -1.8
TY1A-ER1P0CX71 snR80snR80 171 nt3.83□□□□□ -1.8
TY1A-ER1P0CX71 BAT1YHR208W 1182 nt3.83□□□□□ -1.8
TY1A-ER1P0CX71 URM1YIL008W 300 nt3.83□□□□□ -1.8
TY1A-ER1P0CX71 YBL073WYBL073W 312 nt3.83□□□□□ -1.8
TY1A-ER1P0CX71 THI21YPL258C 1656 nt3.83□□□□□ -1.8
TY1A-ER1P0CX71 VPS73YGL104C 1461 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 YGL149WYGL149W 306 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 PAU14YIL176C 363 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 PAU1YJL223C 363 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 HHF1YBR009C 312 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 DIP2YLR129W 2832 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 BCK2YER167W 2556 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 KIN4YOR233W 2403 nt3.82□□□□□ -1.8
TY1A-ER1P0CX71 DNM1YLL001W 2274 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 146 ms