Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCRT1Q9BWW7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 KRT16P3-201ENST00000439127 1283 ntBASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 AC079089.2-201ENST00000531211 1277 ntBASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SCRT1Q9BWW7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCRT1Q9BWW7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.58■□□□□ 0.25
SCRT1Q9BWW7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
SCRT1Q9BWW7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCRT1Q9BWW7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCRT1Q9BWW7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCRT1Q9BWW7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 AC099778.1-201ENST00000568593 1911 ntBASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 AL512408.1-201ENST00000569378 2000 ntBASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCRT1Q9BWW7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.57■□□□□ 0.24
SCRT1Q9BWW7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 OR7E47P-201ENST00000546390 1422 ntBASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 AC099791.2-201ENST00000605725 427 ntBASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCRT1Q9BWW7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.55■□□□□ 0.24
SCRT1Q9BWW7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCRT1Q9BWW7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCRT1Q9BWW7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.55■□□□□ 0.24
SCRT1Q9BWW7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCRT1Q9BWW7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCRT1Q9BWW7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms