Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CWC24YLR323C 780 nt2.35□□□□□ -2.03
TDA11P38854 YMR158C-AYMR158C-A 138 nt2.35□□□□□ -2.03
TDA11P38854 MRPS8YMR158W 468 nt2.35□□□□□ -2.03
TDA11P38854 snR191snR191 274 nt2.35□□□□□ -2.03
TDA11P38854 SIP3YNL257C 3690 nt2.35□□□□□ -2.03
TDA11P38854 ESC2YDR363W 1371 nt2.35□□□□□ -2.03
TDA11P38854 MAL33YBR297W 1407 nt2.34□□□□□ -2.03
TDA11P38854 YHR032W-AYHR032W-A 180 nt2.34□□□□□ -2.03
TDA11P38854 YJL032WYJL032W 315 nt2.34□□□□□ -2.03
TDA11P38854 YKL069WYKL069W 543 nt2.34□□□□□ -2.03
TDA11P38854 RPS1AYLR441C 768 nt2.34□□□□□ -2.03
TDA11P38854 ATX1YNL259C 222 nt2.34□□□□□ -2.03
TDA11P38854 RRD2YPL152W 1077 nt2.34□□□□□ -2.03
TDA11P38854 PET20YPL159C 762 nt2.34□□□□□ -2.03
TDA11P38854 CUP9YPL177C 921 nt2.34□□□□□ -2.03
TDA11P38854 SYO1YDL063C 1863 nt2.34□□□□□ -2.03
TDA11P38854 TRS130YMR218C 3309 nt2.34□□□□□ -2.03
TDA11P38854 MCD1YDL003W 1701 nt2.34□□□□□ -2.04
TDA11P38854 RTG3YBL103C 1461 nt2.33□□□□□ -2.04
TDA11P38854 ARK1YNL020C 1917 nt2.33□□□□□ -2.04
TDA11P38854 STH1YIL126W 4080 nt2.33□□□□□ -2.04
TDA11P38854 PEX18YHR160C 852 nt2.33□□□□□ -2.04
TDA11P38854 RNR2YJL026W 1200 nt2.33□□□□□ -2.04
TDA11P38854 RFA3YJL173C 369 nt2.33□□□□□ -2.04
TDA11P38854 YAL059C-AYAL059C-A 423 nt2.33□□□□□ -2.04
TDA11P38854 PAU23YLR037C 375 nt2.33□□□□□ -2.04
TDA11P38854 YBL062WYBL062W 381 nt2.33□□□□□ -2.04
TDA11P38854 YNL089CYNL089C 477 nt2.33□□□□□ -2.04
TDA11P38854 COQ10YOL008W 624 nt2.33□□□□□ -2.04
TDA11P38854 PEX27YOR193W 1131 nt2.33□□□□□ -2.04
TDA11P38854 HAT1YPL001W 1125 nt2.33□□□□□ -2.04
TDA11P38854 ALG14YBR070C 714 nt2.33□□□□□ -2.04
TDA11P38854 PIS1YPR113W 663 nt2.33□□□□□ -2.04
TDA11P38854 RFC5YBR087W 1065 nt2.33□□□□□ -2.04
TDA11P38854 FAR11YNL127W 2862 nt2.33□□□□□ -2.04
TDA11P38854 RLI1YDR091C 1827 nt2.33□□□□□ -2.04
TDA11P38854 AGE1YDR524C 1449 nt2.33□□□□□ -2.04
TDA11P38854 PHO2YDL106C 1680 nt2.32□□□□□ -2.04
TDA11P38854 RPL27BYDR471W 411 nt2.32□□□□□ -2.04
TDA11P38854 YMR31YFR049W 372 nt2.32□□□□□ -2.04
TDA11P38854 OST5YGL226C-A 261 nt2.32□□□□□ -2.04
TDA11P38854 YIL068W-AYIL068W-A 384 nt2.32□□□□□ -2.04
TDA11P38854 SGT1YOR057W 1188 nt2.32□□□□□ -2.04
TDA11P38854 YRO2YBR054W 1035 nt2.32□□□□□ -2.04
TDA11P38854 MRPL40YPL173W 894 nt2.32□□□□□ -2.04
TDA11P38854 SHG1YBR258C 429 nt2.32□□□□□ -2.04
TDA11P38854 NOP14YDL148C 2433 nt2.32□□□□□ -2.04
TDA11P38854 YKL075CYKL075C 1353 nt2.32□□□□□ -2.04
TDA11P38854 ANR2YKL047W 1551 nt2.32□□□□□ -2.04
TDA11P38854 YER091C-AYER091C-A 222 nt2.31□□□□□ -2.04
TDA11P38854 SVP26YHR181W 687 nt2.31□□□□□ -2.04
TDA11P38854 AIM23YJL131C 1071 nt2.31□□□□□ -2.04
TDA11P38854 HYM1YKL189W 1200 nt2.31□□□□□ -2.04
TDA11P38854 YLR050CYLR050C 486 nt2.31□□□□□ -2.04
TDA11P38854 AIM36YMR157C 768 nt2.31□□□□□ -2.04
TDA11P38854 FPR1YNL135C 345 nt2.31□□□□□ -2.04
TDA11P38854 RPB8YOR224C 441 nt2.31□□□□□ -2.04
TDA11P38854 SLF1YDR515W 1344 nt2.31□□□□□ -2.04
TDA11P38854 SIR3YLR442C 2937 nt2.31□□□□□ -2.04
TDA11P38854 JJJ2YJL162C 1752 nt2.31□□□□□ -2.04
TDA11P38854 TOP2YNL088W 4287 nt2.3□□□□□ -2.04
TDA11P38854 DNA2YHR164C 4569 nt2.3□□□□□ -2.04
TDA11P38854 YCR064CYCR064C 411 nt2.3□□□□□ -2.04
TDA11P38854 GPI19YDR437W 423 nt2.3□□□□□ -2.04
TDA11P38854 CTK2YJL006C 972 nt2.3□□□□□ -2.04
TDA11P38854 AIM32YML050W 936 nt2.3□□□□□ -2.04
TDA11P38854 CSI2YOL007C 1026 nt2.3□□□□□ -2.04
TDA11P38854 HUA2YOR284W 732 nt2.3□□□□□ -2.04
TDA11P38854 ISU1YPL135W 498 nt2.3□□□□□ -2.04
TDA11P38854 POM152YMR129W 4014 nt2.3□□□□□ -2.04
TDA11P38854 NUR1YDL089W 1455 nt2.3□□□□□ -2.04
TDA11P38854 ASI3YNL008C 2031 nt2.3□□□□□ -2.04
TDA11P38854 SDC25YLL016W 3147 nt2.3□□□□□ -2.04
TDA11P38854 APC2YLR127C 2562 nt2.29□□□□□ -2.04
TDA11P38854 YGR053CYGR053C 852 nt2.29□□□□□ -2.04
TDA11P38854 RPF2YKR081C 1035 nt2.29□□□□□ -2.04
TDA11P38854 RPL36AYMR194W 303 nt2.29□□□□□ -2.04
TDA11P38854 GRE2YOL151W 1029 nt2.29□□□□□ -2.04
TDA11P38854 YOR097CYOR097C 528 nt2.29□□□□□ -2.04
TDA11P38854 SAP185YJL098W 3177 nt2.29□□□□□ -2.04
TDA11P38854 PDR3YBL005W 2931 nt2.29□□□□□ -2.04
TDA11P38854 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
TDA11P38854 OSW7YFR039C 1533 nt2.28□□□□□ -2.04
TDA11P38854 YLR108CYLR108C 1458 nt2.28□□□□□ -2.04
TDA11P38854 SNA4YDL123W 423 nt2.28□□□□□ -2.04
TDA11P38854 CBS2YDR197W 1170 nt2.28□□□□□ -2.04
TDA11P38854 HTB1YDR224C 396 nt2.28□□□□□ -2.04
TDA11P38854 YKL165C-AYKL165C-A 234 nt2.28□□□□□ -2.04
TDA11P38854 EMC6YLL014W 327 nt2.28□□□□□ -2.04
TDA11P38854 RPS30AYLR287C-A 192 nt2.28□□□□□ -2.04
TDA11P38854 SPP41YDR464W 4308 nt2.28□□□□□ -2.05
TDA11P38854 YCT1YLL055W 1596 nt2.27□□□□□ -2.05
TDA11P38854 ATC1YDR184C 885 nt2.27□□□□□ -2.05
TDA11P38854 RPL11BYGR085C 525 nt2.27□□□□□ -2.05
TDA11P38854 OTU2YHL013C 924 nt2.27□□□□□ -2.05
TDA11P38854 YIL156W-BYIL156W-B 222 nt2.27□□□□□ -2.05
TDA11P38854 YOL107WYOL107W 1029 nt2.27□□□□□ -2.05
TDA11P38854 YOR050CYOR050C 348 nt2.27□□□□□ -2.05
TDA11P38854 RPL11AYPR102C 525 nt2.27□□□□□ -2.05
TDA11P38854 RRP15YPR143W 753 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 106.1 ms