Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC105233.4-201ENST00000642045 216 ntBASIC17.93■□□□□ 0.46
SFTPBP07988 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.93■□□□□ 0.46
SFTPBP07988 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.93■□□□□ 0.46
SFTPBP07988 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SFTPBP07988 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SFTPBP07988 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.92■□□□□ 0.46
SFTPBP07988 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.92■□□□□ 0.46
SFTPBP07988 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFTPBP07988 AL049796.1-201ENST00000565336 1766 ntBASIC17.92■□□□□ 0.46
SFTPBP07988 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.92■□□□□ 0.46
SFTPBP07988 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SFTPBP07988 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SFTPBP07988 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SFTPBP07988 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.92■□□□□ 0.46
SFTPBP07988 YBX1P1-201ENST00000445822 960 ntBASIC17.92■□□□□ 0.46
SFTPBP07988 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
SFTPBP07988 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
SFTPBP07988 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFTPBP07988 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFTPBP07988 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFTPBP07988 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SFTPBP07988 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.92■□□□□ 0.46
SFTPBP07988 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.91■□□□□ 0.46
SFTPBP07988 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.91■□□□□ 0.46
SFTPBP07988 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SFTPBP07988 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SFTPBP07988 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 AC027612.3-201ENST00000413684 1047 ntBASIC17.91■□□□□ 0.46
SFTPBP07988 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.91■□□□□ 0.46
SFTPBP07988 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.91■□□□□ 0.46
SFTPBP07988 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFTPBP07988 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
SFTPBP07988 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SFTPBP07988 AC009237.3-201ENST00000393279 1427 ntBASIC17.9■□□□□ 0.46
SFTPBP07988 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.9■□□□□ 0.46
SFTPBP07988 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.9■□□□□ 0.46
SFTPBP07988 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.9■□□□□ 0.46
SFTPBP07988 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFTPBP07988 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.9■□□□□ 0.46
SFTPBP07988 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.9■□□□□ 0.46
SFTPBP07988 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.9■□□□□ 0.46
SFTPBP07988 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.9■□□□□ 0.46
SFTPBP07988 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.9■□□□□ 0.46
SFTPBP07988 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SFTPBP07988 AC055733.4-201ENST00000638462 1354 ntBASIC17.9■□□□□ 0.46
SFTPBP07988 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
SFTPBP07988 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SFTPBP07988 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SFTPBP07988 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SFTPBP07988 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.89■□□□□ 0.45
SFTPBP07988 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.89■□□□□ 0.45
SFTPBP07988 AL162430.1-201ENST00000480705 870 ntBASIC17.89■□□□□ 0.45
SFTPBP07988 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.89■□□□□ 0.45
SFTPBP07988 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.89■□□□□ 0.45
SFTPBP07988 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.89■□□□□ 0.45
SFTPBP07988 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.89■□□□□ 0.45
SFTPBP07988 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.89■□□□□ 0.45
SFTPBP07988 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SFTPBP07988 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.89■□□□□ 0.45
SFTPBP07988 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SFTPBP07988 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SFTPBP07988 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms