Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITM2AO43736 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITM2AO43736 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ITM2AO43736 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITM2AO43736 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITM2AO43736 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.33■□□□□ 0.85
ITM2AO43736 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 AL356441.2-201ENST00000443009 864 ntBASIC20.33■□□□□ 0.85
ITM2AO43736 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.33■□□□□ 0.85
ITM2AO43736 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITM2AO43736 AC131281.2-201ENST00000520478 145 ntBASIC20.33■□□□□ 0.85
ITM2AO43736 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITM2AO43736 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.33■□□□□ 0.84
ITM2AO43736 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITM2AO43736 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITM2AO43736 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.32■□□□□ 0.84
ITM2AO43736 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ITM2AO43736 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
ITM2AO43736 BX842568.3-201ENST00000418104 571 ntBASIC20.32■□□□□ 0.84
ITM2AO43736 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.32■□□□□ 0.84
ITM2AO43736 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.32■□□□□ 0.84
ITM2AO43736 AC009237.3-201ENST00000393279 1427 ntBASIC20.32■□□□□ 0.84
ITM2AO43736 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.32■□□□□ 0.84
ITM2AO43736 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ITM2AO43736 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.32■□□□□ 0.84
ITM2AO43736 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITM2AO43736 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ITM2AO43736 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.31■□□□□ 0.84
ITM2AO43736 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ITM2AO43736 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.31■□□□□ 0.84
ITM2AO43736 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ITM2AO43736 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.31■□□□□ 0.84
ITM2AO43736 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITM2AO43736 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.3■□□□□ 0.84
ITM2AO43736 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.3■□□□□ 0.84
ITM2AO43736 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ITM2AO43736 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.3■□□□□ 0.84
ITM2AO43736 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ITM2AO43736 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ITM2AO43736 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITM2AO43736 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
ITM2AO43736 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.29■□□□□ 0.84
ITM2AO43736 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ITM2AO43736 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 MIR4767-201ENST00000582827 78 ntBASIC20.29■□□□□ 0.84
ITM2AO43736 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.29■□□□□ 0.84
ITM2AO43736 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
ITM2AO43736 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITM2AO43736 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.29■□□□□ 0.84
ITM2AO43736 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.28■□□□□ 0.84
ITM2AO43736 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ITM2AO43736 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.28■□□□□ 0.84
ITM2AO43736 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
ITM2AO43736 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms