Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.16■□□□□ 0.02
CHCHD1Q96BP2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 AC079089.2-201ENST00000531211 1277 ntBASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CHCHD1Q96BP2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.02
CHCHD1Q96BP2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 LONRF2P2-201ENST00000439212 571 ntBASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 OR7E47P-201ENST00000546390 1422 ntBASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHCHD1Q96BP2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHCHD1Q96BP2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHCHD1Q96BP2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHCHD1Q96BP2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHCHD1Q96BP2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms