Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.76■□□□□ 0.27
VMA21Q3ZAQ7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 AC138932.1-201ENST00000534164 6830 ntBASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 POU5F1P4-201ENST00000413175 1085 ntBASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VMA21Q3ZAQ7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 AC120498.10-201ENST00000621827 505 ntBASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VMA21Q3ZAQ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.73■□□□□ 0.27
VMA21Q3ZAQ7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VMA21Q3ZAQ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 AC121338.2-201ENST00000622535 1744 ntBASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 AC006128.1-201ENST00000624704 1661 ntBASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VMA21Q3ZAQ7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
VMA21Q3ZAQ7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
VMA21Q3ZAQ7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VMA21Q3ZAQ7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.7■□□□□ 0.26
VMA21Q3ZAQ7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms