Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 ECO1YFR027W 846 nt4.33□□□□□ -1.72
PUF3Q07807 HIS5YIL116W 1158 nt4.33□□□□□ -1.72
PUF3Q07807 YAL031W-AYAL031W-A 309 nt4.33□□□□□ -1.72
PUF3Q07807 RPL14AYKL006W 417 nt4.33□□□□□ -1.72
PUF3Q07807 YMR307C-AYMR307C-A 195 nt4.33□□□□□ -1.72
PUF3Q07807 YOR192C-CYOR192C-C 237 nt4.33□□□□□ -1.72
PUF3Q07807 TPA1YER049W 1935 nt4.33□□□□□ -1.72
PUF3Q07807 TPD3YAL016W 1908 nt4.33□□□□□ -1.72
PUF3Q07807 SMP3YOR149C 1551 nt4.32□□□□□ -1.72
PUF3Q07807 GWT1YJL091C 1473 nt4.32□□□□□ -1.72
PUF3Q07807 SSH1YBR283C 1473 nt4.32□□□□□ -1.72
PUF3Q07807 YSH1YLR277C 2340 nt4.32□□□□□ -1.72
PUF3Q07807 ADP1YCR011C 3150 nt4.32□□□□□ -1.72
PUF3Q07807 CDC36YDL165W 576 nt4.32□□□□□ -1.72
PUF3Q07807 YNR065CYNR065C 3351 nt4.32□□□□□ -1.72 RIP-Chip
PUF3Q07807 ROY1YMR258C 1662 nt4.32□□□□□ -1.72
PUF3Q07807 RRN11YML043C 1524 nt4.31□□□□□ -1.72 RIP-Chip
PUF3Q07807 PTR3YFR029W 2037 nt4.31□□□□□ -1.72
PUF3Q07807 ALR2YFL050C 2577 nt4.31□□□□□ -1.72
PUF3Q07807 IRC2YDR112W 309 nt4.31□□□□□ -1.72
PUF3Q07807 OTU1YFL044C 906 nt4.31□□□□□ -1.72
PUF3Q07807 YIR014WYIR014W 729 nt4.31□□□□□ -1.72
PUF3Q07807 ISA1YLL027W 753 nt4.31□□□□□ -1.72
PUF3Q07807 FCF2YLR051C 654 nt4.31□□□□□ -1.72
PUF3Q07807 YKE2YLR200W 345 nt4.31□□□□□ -1.72
PUF3Q07807 YNL057WYNL057W 333 nt4.31□□□□□ -1.72
PUF3Q07807 KAR9YPL269W 1935 nt4.31□□□□□ -1.72
PUF3Q07807 MUB1YMR100W 1863 nt4.3□□□□□ -1.72
PUF3Q07807 SIP1YDR422C 2448 nt4.3□□□□□ -1.72
PUF3Q07807 MFA1YDR461W 111 nt4.3□□□□□ -1.72
PUF3Q07807 ECM34YHL043W 513 nt4.3□□□□□ -1.72
PUF3Q07807 YJL086CYJL086C 369 nt4.3□□□□□ -1.72
PUF3Q07807 YOL114CYOL114C 609 nt4.3□□□□□ -1.72
PUF3Q07807 HOS3YPL116W 2094 nt4.3□□□□□ -1.72
PUF3Q07807 NAM2YLR382C 2685 nt4.29□□□□□ -1.72 RIP-Chip
PUF3Q07807 YCR045W-AYCR045W-A 351 nt4.29□□□□□ -1.72
PUF3Q07807 RDN58-1RDN58-1 158 nt4.29□□□□□ -1.72
PUF3Q07807 RDN58-2RDN58-2 158 nt4.29□□□□□ -1.72
PUF3Q07807 INN1YNL152W 1230 nt4.29□□□□□ -1.72
PUF3Q07807 YBL108WYBL108W 306 nt4.29□□□□□ -1.72
PUF3Q07807 DIB1YPR082C 432 nt4.29□□□□□ -1.72
PUF3Q07807 YBR242WYBR242W 717 nt4.29□□□□□ -1.72
PUF3Q07807 YCL023CYCL023C 348 nt4.29□□□□□ -1.72
PUF3Q07807 PRS5YOL061W 1491 nt4.29□□□□□ -1.72
PUF3Q07807 RIA1YNL163C 3333 nt4.29□□□□□ -1.72
PUF3Q07807 SHS1YDL225W 1656 nt4.29□□□□□ -1.72
PUF3Q07807 NUP133YKR082W 3474 nt4.29□□□□□ -1.72
PUF3Q07807 SWP82YFL049W 1872 nt4.28□□□□□ -1.72
PUF3Q07807 PMT6YGR199W 2280 nt4.28□□□□□ -1.72
PUF3Q07807 SLK19YOR195W 2466 nt4.28□□□□□ -1.72
PUF3Q07807 SKG6YHR149C 2205 nt4.28□□□□□ -1.72 RIP-Chip
PUF3Q07807 ATP5YDR298C 639 nt4.28□□□□□ -1.72
PUF3Q07807 PAM18YLR008C 507 nt4.28□□□□□ -1.72 RIP-Chip
PUF3Q07807 YNL146C-AYNL146C-A 195 nt4.28□□□□□ -1.72
PUF3Q07807 VAC8YEL013W 1737 nt4.28□□□□□ -1.72
PUF3Q07807 BUD6YLR319C 2367 nt4.28□□□□□ -1.72
PUF3Q07807 FLC1YPL221W 2382 nt4.28□□□□□ -1.72
PUF3Q07807 OSH2YDL019C 3852 nt4.28□□□□□ -1.72
PUF3Q07807 CHL1YPL008W 2586 nt4.27□□□□□ -1.73 RIP-Chip
PUF3Q07807 MIS1YBR084W 2928 nt4.27□□□□□ -1.73
PUF3Q07807 RPP1AYDL081C 321 nt4.27□□□□□ -1.73
PUF3Q07807 YDR183C-AYDR183C-A 258 nt4.27□□□□□ -1.73
PUF3Q07807 SPC19YDR201W 498 nt4.27□□□□□ -1.73
PUF3Q07807 GPP2YER062C 753 nt4.27□□□□□ -1.73
PUF3Q07807 YMR294W-AYMR294W-A 360 nt4.27□□□□□ -1.73
PUF3Q07807 MNT4YNR059W 1743 nt4.26□□□□□ -1.73
PUF3Q07807 YER077CYER077C 2067 nt4.26□□□□□ -1.73
PUF3Q07807 AHA1YDR214W 1053 nt4.26□□□□□ -1.73
PUF3Q07807 YDR246W-AYDR246W-A 201 nt4.26□□□□□ -1.73
PUF3Q07807 REC104YHR157W 549 nt4.26□□□□□ -1.73
PUF3Q07807 YNL338WYNL338W 159 nt4.26□□□□□ -1.73
PUF3Q07807 SEN1YLR430W 6696 nt4.26□□□□□ -1.73
PUF3Q07807 MTR10YOR160W 2919 nt4.26□□□□□ -1.73
PUF3Q07807 FRT2YAL028W 1587 nt4.26□□□□□ -1.73
PUF3Q07807 SNF12YNR023W 1701 nt4.26□□□□□ -1.73
PUF3Q07807 YPK9YOR291W 4419 nt4.26□□□□□ -1.73
PUF3Q07807 NHX1YDR456W 1902 nt4.25□□□□□ -1.73
PUF3Q07807 PPZ1YML016C 2079 nt4.25□□□□□ -1.73
PUF3Q07807 OPI6YDL096C 327 nt4.25□□□□□ -1.73
PUF3Q07807 ACK1YDL203C 1872 nt4.25□□□□□ -1.73
PUF3Q07807 SLX8YER116C 825 nt4.25□□□□□ -1.73
PUF3Q07807 YGL165CYGL165C 579 nt4.25□□□□□ -1.73
PUF3Q07807 YHL026CYHL026C 948 nt4.25□□□□□ -1.73
PUF3Q07807 YOL153CYOL153C 1746 nt4.25□□□□□ -1.73 RIP-Chip
PUF3Q07807 TSC3YBR058C-A 243 nt4.25□□□□□ -1.73
PUF3Q07807 HMG1YML075C 3165 nt4.25□□□□□ -1.73
PUF3Q07807 IRC10YOL015W 1761 nt4.25□□□□□ -1.73
PUF3Q07807 KIN2YLR096W 3444 nt4.24□□□□□ -1.73
PUF3Q07807 YFR010W-AYFR010W-A 189 nt4.24□□□□□ -1.73
PUF3Q07807 RPB9YGL070C 369 nt4.24□□□□□ -1.73
PUF3Q07807 RPS4BYHR203C 786 nt4.24□□□□□ -1.73
PUF3Q07807 tW(UCA)QtW(UCA)Q 74 nt4.24□□□□□ -1.73
PUF3Q07807 YJL202CYJL202C 348 nt4.24□□□□□ -1.73
PUF3Q07807 RPS4AYJR145C 786 nt4.24□□□□□ -1.73
PUF3Q07807 YLR076CYLR076C 423 nt4.24□□□□□ -1.73
PUF3Q07807 YOR146WYOR146W 306 nt4.24□□□□□ -1.73
PUF3Q07807 RRD2YPL152W 1077 nt4.24□□□□□ -1.73
PUF3Q07807 TCO89YPL180W 2400 nt4.24□□□□□ -1.73
PUF3Q07807 NOC2YOR206W 2133 nt4.24□□□□□ -1.73
PUF3Q07807 VPS45YGL095C 1734 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 42.2 ms