Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PMS1P54277 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PMS1P54277 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.88■■□□□ 1.25
PMS1P54277 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PMS1P54277 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PMS1P54277 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PMS1P54277 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PMS1P54277 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.88■■□□□ 1.25
PMS1P54277 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.87■■□□□ 1.25
PMS1P54277 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PMS1P54277 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.87■■□□□ 1.25
PMS1P54277 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PMS1P54277 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.87■■□□□ 1.25
PMS1P54277 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.87■■□□□ 1.25
PMS1P54277 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.87■■□□□ 1.25
PMS1P54277 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.87■■□□□ 1.25
PMS1P54277 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.87■■□□□ 1.25
PMS1P54277 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.87■■□□□ 1.25
PMS1P54277 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PMS1P54277 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 AC027702.1-201ENST00000563810 1770 ntBASIC22.86■■□□□ 1.25
PMS1P54277 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.86■■□□□ 1.25
PMS1P54277 CCDC92B-201ENST00000575506 885 ntBASIC22.86■■□□□ 1.25
PMS1P54277 AC104187.1-201ENST00000607510 612 ntBASIC22.86■■□□□ 1.25
PMS1P54277 RARRES2P11-201ENST00000635158 484 ntBASIC22.86■■□□□ 1.25
PMS1P54277 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PMS1P54277 AC007225.1-201ENST00000566331 1836 ntBASIC22.86■■□□□ 1.25
PMS1P54277 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PMS1P54277 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PMS1P54277 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PMS1P54277 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
PMS1P54277 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
PMS1P54277 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PMS1P54277 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.85■■□□□ 1.25
PMS1P54277 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PMS1P54277 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.85■■□□□ 1.25
PMS1P54277 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.85■■□□□ 1.25
PMS1P54277 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.85■■□□□ 1.25
PMS1P54277 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PMS1P54277 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PMS1P54277 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
PMS1P54277 AC123595.1-201ENST00000440769 1046 ntBASIC22.85■■□□□ 1.25
PMS1P54277 YBX1P1-201ENST00000445822 960 ntBASIC22.85■■□□□ 1.25
PMS1P54277 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.85■■□□□ 1.25
PMS1P54277 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PMS1P54277 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PMS1P54277 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PMS1P54277 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PMS1P54277 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.84■■□□□ 1.25
PMS1P54277 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 POU5F1P4-201ENST00000413175 1085 ntBASIC22.84■■□□□ 1.25
PMS1P54277 AC010141.2-201ENST00000452426 721 ntBASIC22.84■■□□□ 1.25
PMS1P54277 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.84■■□□□ 1.25
PMS1P54277 KRT18P61-201ENST00000585825 1298 ntBASIC22.84■■□□□ 1.25
PMS1P54277 AC008175.2-201ENST00000612840 297 ntBASIC22.84■■□□□ 1.25
PMS1P54277 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PMS1P54277 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.83■■□□□ 1.25
PMS1P54277 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
PMS1P54277 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PMS1P54277 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.83■■□□□ 1.25
PMS1P54277 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PMS1P54277 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.83■■□□□ 1.25
PMS1P54277 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PMS1P54277 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.83■■□□□ 1.25
PMS1P54277 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PMS1P54277 SLC7A5P2-201ENST00000553010 536 ntBASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms