Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 COA3YJL062W-A 258 nt4.06□□□□□ -1.76 RIP-Chip
PUB1P32588 CNB1YKL190W 528 nt4.06□□□□□ -1.76
PUB1P32588 DAD3YBR233W-A 285 nt4.06□□□□□ -1.76
PUB1P32588 NIC96YFR002W 2520 nt4.06□□□□□ -1.76
PUB1P32588 CYM1YDR430C 2970 nt4.06□□□□□ -1.76
PUB1P32588 MNT4YNR059W 1743 nt4.05□□□□□ -1.76
PUB1P32588 NOP6YDL213C 678 nt4.05□□□□□ -1.76
PUB1P32588 GPP2YER062C 753 nt4.05□□□□□ -1.76
PUB1P32588 RPL30YGL030W 318 nt4.05□□□□□ -1.76
PUB1P32588 YGL149WYGL149W 306 nt4.05□□□□□ -1.76
PUB1P32588 FMC1YIL098C 468 nt4.05□□□□□ -1.76
PUB1P32588 YLR342W-AYLR342W-A 174 nt4.05□□□□□ -1.76
PUB1P32588 URA10YMR271C 684 nt4.05□□□□□ -1.76
PUB1P32588 YOR385WYOR385W 873 nt4.05□□□□□ -1.76 RIP-Chip
PUB1P32588 RPC40YPR110C 1008 nt4.05□□□□□ -1.76
PUB1P32588 SWI3YJL176C 2478 nt4.05□□□□□ -1.76 RIP-Chip
PUB1P32588 PRP43YGL120C 2304 nt4.05□□□□□ -1.76
PUB1P32588 TPD3YAL016W 1908 nt4.05□□□□□ -1.76
PUB1P32588 SUL2YLR092W 2682 nt4.05□□□□□ -1.76
PUB1P32588 GPI10YGL142C 1851 nt4.05□□□□□ -1.76 RIP-Chip
PUB1P32588 GSM1YJL103C 1857 nt4.05□□□□□ -1.76
PUB1P32588 CTM1YHR109W 1758 nt4.04□□□□□ -1.76
PUB1P32588 MCD1YDL003W 1701 nt4.04□□□□□ -1.76
PUB1P32588 BNA4YBL098W 1383 nt4.04□□□□□ -1.76
PUB1P32588 YJL016WYJL016W 1686 nt4.04□□□□□ -1.76 RIP-Chip
PUB1P32588 NUP116YMR047C 3342 nt4.04□□□□□ -1.76
PUB1P32588 YJL150WYJL150W 303 nt4.04□□□□□ -1.76
PUB1P32588 YMR194C-AYMR194C-A 225 nt4.04□□□□□ -1.76 RIP-Chip
PUB1P32588 SAP30YMR263W 606 nt4.04□□□□□ -1.76
PUB1P32588 YOL155W-AYOL155W-A 135 nt4.04□□□□□ -1.76
PUB1P32588 YPL229WYPL229W 621 nt4.04□□□□□ -1.76
PUB1P32588 SCY1YGL083W 2415 nt4.04□□□□□ -1.76 RIP-Chip
PUB1P32588 ATM1YMR301C 2073 nt4.04□□□□□ -1.76
PUB1P32588 MNN1YER001W 2289 nt4.04□□□□□ -1.76
PUB1P32588 DSF2YBR007C 2211 nt4.03□□□□□ -1.76
PUB1P32588 ATH1YPR026W 3636 nt4.03□□□□□ -1.76
PUB1P32588 YDR344CYDR344C 444 nt4.03□□□□□ -1.76
PUB1P32588 WIP1YDR374W-A 270 nt4.03□□□□□ -1.76
PUB1P32588 EMI1YDR512C 564 nt4.03□□□□□ -1.76
PUB1P32588 MIC19YFR011C 513 nt4.03□□□□□ -1.76
PUB1P32588 YGR174W-AYGR174W-A 87 nt4.03□□□□□ -1.76
PUB1P32588 RPL8BYLL045C 771 nt4.03□□□□□ -1.76
PUB1P32588 RPL15AYLR029C 615 nt4.03□□□□□ -1.76
PUB1P32588 RDN58-1RDN58-1 158 nt4.03□□□□□ -1.76
PUB1P32588 RDN58-2RDN58-2 158 nt4.03□□□□□ -1.76
PUB1P32588 INO4YOL108C 456 nt4.03□□□□□ -1.76
PUB1P32588 SRL1YOR247W 633 nt4.03□□□□□ -1.76 RIP-Chip
PUB1P32588 PHO88YBR106W 567 nt4.03□□□□□ -1.76 RIP-Chip
PUB1P32588 SEC9YGR009C 1956 nt4.03□□□□□ -1.76
PUB1P32588 APL6YGR261C 2430 nt4.03□□□□□ -1.76
PUB1P32588 SCW11YGL028C 1629 nt4.03□□□□□ -1.77 RIP-Chip
PUB1P32588 HCS1YKL017C 2052 nt4.02□□□□□ -1.77
PUB1P32588 YDR526CYDR526C 471 nt4.02□□□□□ -1.77
PUB1P32588 YFR010W-AYFR010W-A 189 nt4.02□□□□□ -1.77
PUB1P32588 YGR164WYGR164W 336 nt4.02□□□□□ -1.77
PUB1P32588 AYR1YIL124W 894 nt4.02□□□□□ -1.77
PUB1P32588 GTT2YLL060C 702 nt4.02□□□□□ -1.77
PUB1P32588 OST6YML019W 999 nt4.02□□□□□ -1.77 RIP-Chip
PUB1P32588 ATX1YNL259C 222 nt4.02□□□□□ -1.77 RIP-Chip
PUB1P32588 IRC23YOR044W 474 nt4.02□□□□□ -1.77 RIP-Chip
PUB1P32588 UTP15YMR093W 1542 nt4.01□□□□□ -1.77
PUB1P32588 NDC80YIL144W 2076 nt4.01□□□□□ -1.77
PUB1P32588 VPS73YGL104C 1461 nt4.01□□□□□ -1.77
PUB1P32588 YCR023CYCR023C 1836 nt4.01□□□□□ -1.77
PUB1P32588 MRPL39YML009C 213 nt4.01□□□□□ -1.77 RIP-Chip
PUB1P32588 STI1YOR027W 1770 nt4.01□□□□□ -1.77
PUB1P32588 YLL032CYLL032C 2478 nt4.01□□□□□ -1.77
PUB1P32588 IMD4YML056C 1575 nt4.01□□□□□ -1.77
PUB1P32588 PXA1YPL147W 2613 nt4.01□□□□□ -1.77
PUB1P32588 PCA1YBR295W 3651 nt4.01□□□□□ -1.77
PUB1P32588 ACK1YDL203C 1872 nt4.01□□□□□ -1.77
PUB1P32588 YND1YER005W 1893 nt4.01□□□□□ -1.77 RIP-Chip
PUB1P32588 HOP1YIL072W 1818 nt4□□□□□ -1.77
PUB1P32588 PRS5YOL061W 1491 nt4□□□□□ -1.77 RIP-Chip
PUB1P32588 IZH3YLR023C 1632 nt4□□□□□ -1.77
PUB1P32588 HOYDL227C 1761 nt4□□□□□ -1.77
PUB1P32588 PRP28YDR243C 1767 nt4□□□□□ -1.77
PUB1P32588 PRM7YDL039C 2097 nt4□□□□□ -1.77
PUB1P32588 YER088C-AYER088C-A 324 nt4□□□□□ -1.77
PUB1P32588 YFR054CYFR054C 579 nt4□□□□□ -1.77
PUB1P32588 tS(AGA)D3tS(AGA)D3 83 nt4□□□□□ -1.77
PUB1P32588 RPS4BYHR203C 786 nt4□□□□□ -1.77
PUB1P32588 TMA22YJR014W 597 nt4□□□□□ -1.77
PUB1P32588 snR13snR13 124 nt4□□□□□ -1.77
PUB1P32588 BLM10YFL007W 6432 nt4□□□□□ -1.77
PUB1P32588 HOT1YMR172W 2160 nt4□□□□□ -1.77
PUB1P32588 PRM1YNL279W 1986 nt4□□□□□ -1.77
PUB1P32588 GAD1YMR250W 1758 nt3.99□□□□□ -1.77
PUB1P32588 IRC4YDR540C 540 nt3.99□□□□□ -1.77
PUB1P32588 YEL020C-BYEL020C-B 198 nt3.99□□□□□ -1.77
PUB1P32588 GSY1YFR015C 2127 nt3.99□□□□□ -1.77
PUB1P32588 VEL1YGL258W 621 nt3.99□□□□□ -1.77
PUB1P32588 RPL11BYGR085C 525 nt3.99□□□□□ -1.77
PUB1P32588 IST1YNL265C 897 nt3.99□□□□□ -1.77
PUB1P32588 SIL1YOL031C 1266 nt3.99□□□□□ -1.77 RIP-Chip
PUB1P32588 RPL11AYPR102C 525 nt3.99□□□□□ -1.77
PUB1P32588 MBP1YDL056W 2502 nt3.99□□□□□ -1.77
PUB1P32588 CTR86YCR054C 1692 nt3.99□□□□□ -1.77
PUB1P32588 YPL260WYPL260W 1656 nt3.99□□□□□ -1.77
PUB1P32588 SUM1YDR310C 3189 nt3.99□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 72.2 ms