Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 ISU1YPL135W 498 nt2.42□□□□□ -2.02
VPS3P23643 RFC5YBR087W 1065 nt2.42□□□□□ -2.02
VPS3P23643 SMC6YLR383W 3345 nt2.42□□□□□ -2.02
VPS3P23643 SDC25YLL016W 3147 nt2.42□□□□□ -2.02
VPS3P23643 YNL018CYNL018C 1839 nt2.42□□□□□ -2.02
VPS3P23643 NNF1YJR112W 606 nt2.41□□□□□ -2.02
VPS3P23643 YKR070WYKR070W 1059 nt2.41□□□□□ -2.02
VPS3P23643 GSP1YLR293C 660 nt2.41□□□□□ -2.02
VPS3P23643 PNO1YOR145C 825 nt2.41□□□□□ -2.02
VPS3P23643 UBP1YDL122W 2430 nt2.41□□□□□ -2.02
VPS3P23643 STH1YIL126W 4080 nt2.41□□□□□ -2.02
VPS3P23643 TOF1YNL273W 3717 nt2.4□□□□□ -2.02
VPS3P23643 DNL4YOR005C 2835 nt2.4□□□□□ -2.03
VPS3P23643 snR68snR68 136 nt2.4□□□□□ -2.03
VPS3P23643 YDR124WYDR124W 975 nt2.4□□□□□ -2.03
VPS3P23643 FMN1YDR236C 657 nt2.4□□□□□ -2.03
VPS3P23643 YKL165C-AYKL165C-A 234 nt2.4□□□□□ -2.03
VPS3P23643 RPL6BYLR448W 531 nt2.4□□□□□ -2.03
VPS3P23643 AIM36YMR157C 768 nt2.4□□□□□ -2.03
VPS3P23643 GCY1YOR120W 939 nt2.4□□□□□ -2.03
VPS3P23643 YBR292CYBR292C 372 nt2.4□□□□□ -2.03
VPS3P23643 YBL005W-AYBL005W-A 1323 nt2.4□□□□□ -2.03
VPS3P23643 YMR046CYMR046C 1323 nt2.4□□□□□ -2.03
VPS3P23643 BNI1YNL271C 5862 nt2.39□□□□□ -2.03
VPS3P23643 YPK1YKL126W 2043 nt2.39□□□□□ -2.03
VPS3P23643 TRM2YKR056W 1920 nt2.39□□□□□ -2.03
VPS3P23643 ROY1YMR258C 1662 nt2.39□□□□□ -2.03
VPS3P23643 RPL13AYDL082W 600 nt2.39□□□□□ -2.03
VPS3P23643 TIM9YEL020W-A 264 nt2.39□□□□□ -2.03
VPS3P23643 YHR180W-AYHR180W-A 183 nt2.39□□□□□ -2.03
VPS3P23643 ATP7YKL016C 525 nt2.39□□□□□ -2.03
VPS3P23643 YLR163W-AYLR163W-A 114 nt2.39□□□□□ -2.03
VPS3P23643 YNL046WYNL046W 519 nt2.39□□□□□ -2.03
VPS3P23643 YOL098CYOL098C 3114 nt2.39□□□□□ -2.03
VPS3P23643 CDC5YMR001C 2118 nt2.38□□□□□ -2.03
VPS3P23643 YFH7YFR007W 1062 nt2.38□□□□□ -2.03
VPS3P23643 BOS1YLR078C 735 nt2.38□□□□□ -2.03
VPS3P23643 MUB1YMR100W 1863 nt2.38□□□□□ -2.03
VPS3P23643 ICY1YMR195W 384 nt2.38□□□□□ -2.03
VPS3P23643 RGL1YPL066W 1440 nt2.38□□□□□ -2.03
VPS3P23643 YBR209WYBR209W 318 nt2.38□□□□□ -2.03
VPS3P23643 DAD3YBR233W-A 285 nt2.38□□□□□ -2.03
VPS3P23643 SAP190YKR028W 3102 nt2.38□□□□□ -2.03
VPS3P23643 BIT61YJL058C 1632 nt2.38□□□□□ -2.03
VPS3P23643 GCD2YGR083C 1956 nt2.38□□□□□ -2.03
VPS3P23643 IPI3YNL182C 1668 nt2.37□□□□□ -2.03
VPS3P23643 INP53YOR109W 3324 nt2.37□□□□□ -2.03
VPS3P23643 PDS5YMR076C 3834 nt2.37□□□□□ -2.03
VPS3P23643 DSE1YER124C 1722 nt2.37□□□□□ -2.03
VPS3P23643 SEC16YPL085W 6588 nt2.37□□□□□ -2.03
VPS3P23643 DIG2YDR480W 972 nt2.37□□□□□ -2.03
VPS3P23643 RPS24AYER074W 408 nt2.37□□□□□ -2.03
VPS3P23643 ERG25YGR060W 930 nt2.37□□□□□ -2.03
VPS3P23643 YIL046W-AYIL046W-A 165 nt2.37□□□□□ -2.03
VPS3P23643 DLT1YMR126C 1029 nt2.37□□□□□ -2.03
VPS3P23643 snR35snR35 204 nt2.37□□□□□ -2.03
VPS3P23643 POM152YMR129W 4014 nt2.37□□□□□ -2.03
VPS3P23643 PUT3YKL015W 2940 nt2.37□□□□□ -2.03
VPS3P23643 MAK11YKL021C 1407 nt2.36□□□□□ -2.03
VPS3P23643 DSE2YHR143W 978 nt2.36□□□□□ -2.03
VPS3P23643 YAL026C-AYAL026C-A 438 nt2.36□□□□□ -2.03
VPS3P23643 AIM32YML050W 936 nt2.36□□□□□ -2.03
VPS3P23643 PEX17YNL214W 600 nt2.36□□□□□ -2.03
VPS3P23643 CCL1YPR025C 1182 nt2.36□□□□□ -2.03
VPS3P23643 RTG3YBL103C 1461 nt2.36□□□□□ -2.03
VPS3P23643 YPR097WYPR097W 3222 nt2.36□□□□□ -2.03
VPS3P23643 AFI1YOR129C 2682 nt2.35□□□□□ -2.03
VPS3P23643 YFR032C-BYFR032C-B 264 nt2.35□□□□□ -2.03
VPS3P23643 UTP30YKR060W 825 nt2.35□□□□□ -2.03
VPS3P23643 YMR099CYMR099C 894 nt2.35□□□□□ -2.03
VPS3P23643 CTL1YMR180C 963 nt2.35□□□□□ -2.03
VPS3P23643 FMP41YNL168C 780 nt2.35□□□□□ -2.03
VPS3P23643 RBL2YOR265W 321 nt2.35□□□□□ -2.03
VPS3P23643 VMA9YCL005W-A 222 nt2.35□□□□□ -2.03
VPS3P23643 UTP6YDR449C 1323 nt2.35□□□□□ -2.03
VPS3P23643 SSY1YDR160W 2559 nt2.35□□□□□ -2.03
VPS3P23643 SNX41YDR425W 1878 nt2.35□□□□□ -2.03
VPS3P23643 NOP56YLR197W 1515 nt2.34□□□□□ -2.03
VPS3P23643 CPR5YDR304C 678 nt2.34□□□□□ -2.03
VPS3P23643 EMI1YDR512C 564 nt2.34□□□□□ -2.03
VPS3P23643 RGI1YER067W 486 nt2.34□□□□□ -2.03
VPS3P23643 SAE2YGL175C 1038 nt2.34□□□□□ -2.03
VPS3P23643 VEL1YGL258W 621 nt2.34□□□□□ -2.03
VPS3P23643 PEX4YGR133W 552 nt2.34□□□□□ -2.03
VPS3P23643 YHR212CYHR212C 336 nt2.34□□□□□ -2.03
VPS3P23643 VPS51YKR020W 495 nt2.34□□□□□ -2.03
VPS3P23643 YAR060CYAR060C 336 nt2.34□□□□□ -2.03
VPS3P23643 RPL36AYMR194W 303 nt2.34□□□□□ -2.03
VPS3P23643 YMR320WYMR320W 306 nt2.34□□□□□ -2.03
VPS3P23643 CRS5YOR031W 210 nt2.34□□□□□ -2.03
VPS3P23643 YOR277CYOR277C 309 nt2.34□□□□□ -2.03
VPS3P23643 CSH1YBR161W 1131 nt2.34□□□□□ -2.03
VPS3P23643 YCL023CYCL023C 348 nt2.34□□□□□ -2.03
VPS3P23643 TRM82YDR165W 1335 nt2.34□□□□□ -2.04
VPS3P23643 YDR170W-AYDR170W-A 1323 nt2.34□□□□□ -2.04
VPS3P23643 SLF1YDR515W 1344 nt2.34□□□□□ -2.04
VPS3P23643 YNL284C-AYNL284C-A 1323 nt2.34□□□□□ -2.04
VPS3P23643 SSQ1YLR369W 1974 nt2.34□□□□□ -2.04
VPS3P23643 HOS4YIL112W 3252 nt2.34□□□□□ -2.04
VPS3P23643 MDM36YPR083W 1740 nt2.34□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms