Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 AC005837.3-201ENST00000612163 286 ntBASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.16■□□□□ 0.5
FOXJ3Q9UPW0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FOXJ3Q9UPW0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.14■□□□□ 0.5
FOXJ3Q9UPW0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
FOXJ3Q9UPW0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 AC121338.2-201ENST00000622535 1744 ntBASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
FOXJ3Q9UPW0 AL391422.3-201ENST00000603791 2761 ntBASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXJ3Q9UPW0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 SMUG1P1-201ENST00000590640 811 ntBASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.12■□□□□ 0.49
FOXJ3Q9UPW0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms