Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 RDN5-6RDN5-6 121 nt4.42□□□□□ -1.7
PUF3Q07807 PKR1YMR123W 369 nt4.42□□□□□ -1.7
PUF3Q07807 YCK3YER123W 1575 nt4.41□□□□□ -1.7
PUF3Q07807 RRI2YOL117W 1938 nt4.41□□□□□ -1.7
PUF3Q07807 RPC11YDR045C 333 nt4.41□□□□□ -1.7
PUF3Q07807 COX4YGL187C 468 nt4.41□□□□□ -1.7
PUF3Q07807 YJL182CYJL182C 318 nt4.41□□□□□ -1.7
PUF3Q07807 YKL069WYKL069W 543 nt4.41□□□□□ -1.7
PUF3Q07807 BET5YML077W 480 nt4.41□□□□□ -1.7
PUF3Q07807 YMR013C-AYMR013C-A 150 nt4.41□□□□□ -1.7
PUF3Q07807 TIM18YOR297C 579 nt4.41□□□□□ -1.7
PUF3Q07807 FLO8YER109C 2400 nt4.41□□□□□ -1.7
PUF3Q07807 PHO84YML123C 1764 nt4.4□□□□□ -1.7
PUF3Q07807 RTR2YDR066C 591 nt4.4□□□□□ -1.71
PUF3Q07807 EMC2YJR088C 879 nt4.4□□□□□ -1.71
PUF3Q07807 YNL276CYNL276C 396 nt4.4□□□□□ -1.71
PUF3Q07807 VPS27YNR006W 1869 nt4.4□□□□□ -1.71
PUF3Q07807 GIP4YAL031C 2283 nt4.4□□□□□ -1.71 RIP-Chip
PUF3Q07807 FOX2YKR009C 2703 nt4.4□□□□□ -1.71
PUF3Q07807 YJR003CYJR003C 1560 nt4.4□□□□□ -1.71
PUF3Q07807 GDH2YDL215C 3279 nt4.4□□□□□ -1.71
PUF3Q07807 GYP6YJL044C 1377 nt4.4□□□□□ -1.71
PUF3Q07807 SYF1YDR416W 2580 nt4.39□□□□□ -1.71
PUF3Q07807 CYC7YEL039C 342 nt4.39□□□□□ -1.71
PUF3Q07807 ISD11YER048W-A 285 nt4.39□□□□□ -1.71
PUF3Q07807 TDA8YAL064C-A 381 nt4.39□□□□□ -1.71
PUF3Q07807 RPL19BYBL027W 570 nt4.39□□□□□ -1.71
PUF3Q07807 ZEO1YOL109W 342 nt4.39□□□□□ -1.71
PUF3Q07807 GRE2YOL151W 1029 nt4.39□□□□□ -1.71
PUF3Q07807 YPR077CYPR077C 372 nt4.39□□□□□ -1.71
PUF3Q07807 WHI3YNL197C 1986 nt4.39□□□□□ -1.71
PUF3Q07807 FMP25YLR077W 1752 nt4.39□□□□□ -1.71 RIP-Chip
PUF3Q07807 KIC1YHR102W 3243 nt4.39□□□□□ -1.71
PUF3Q07807 GRC3YLL035W 1899 nt4.39□□□□□ -1.71
PUF3Q07807 UPC2YDR213W 2742 nt4.38□□□□□ -1.71
PUF3Q07807 SPC105YGL093W 2754 nt4.38□□□□□ -1.71
PUF3Q07807 YDL007C-AYDL007C-A 258 nt4.38□□□□□ -1.71
PUF3Q07807 YDR090CYDR090C 933 nt4.38□□□□□ -1.71
PUF3Q07807 BCP1YDR361C 852 nt4.38□□□□□ -1.71
PUF3Q07807 YER079C-AYER079C-A 339 nt4.38□□□□□ -1.71
PUF3Q07807 YIL020C-AYIL020C-A 339 nt4.38□□□□□ -1.71
PUF3Q07807 YLR466C-BYLR466C-B 117 nt4.38□□□□□ -1.71
PUF3Q07807 YMR316C-AYMR316C-A 312 nt4.38□□□□□ -1.71
PUF3Q07807 TAF12YDR145W 1620 nt4.38□□□□□ -1.71
PUF3Q07807 GPI17YDR434W 1605 nt4.38□□□□□ -1.71
PUF3Q07807 STP2YHR006W 1626 nt4.38□□□□□ -1.71
PUF3Q07807 NUG1YER006W 1563 nt4.37□□□□□ -1.71
PUF3Q07807 snR85snR85 171 nt4.37□□□□□ -1.71
PUF3Q07807 IDP2YLR174W 1239 nt4.37□□□□□ -1.71
PUF3Q07807 SMA2YML066C 1110 nt4.37□□□□□ -1.71
PUF3Q07807 RPL18AYOL120C 561 nt4.37□□□□□ -1.71
PUF3Q07807 VAM10YOR068C 345 nt4.37□□□□□ -1.71
PUF3Q07807 THS1YIL078W 2205 nt4.37□□□□□ -1.71
PUF3Q07807 URC2YDR520C 2319 nt4.37□□□□□ -1.71
PUF3Q07807 SEC59YMR013C 1560 nt4.36□□□□□ -1.71
PUF3Q07807 YDL068WYDL068W 330 nt4.36□□□□□ -1.71
PUF3Q07807 YER023C-AYER023C-A 213 nt4.36□□□□□ -1.71
PUF3Q07807 YFL015CYFL015C 495 nt4.36□□□□□ -1.71
PUF3Q07807 SMX2YFL017W-A 234 nt4.36□□□□□ -1.71
PUF3Q07807 SHE2YKL130C 741 nt4.36□□□□□ -1.71 RIP-Chip
PUF3Q07807 TEN1YLR010C 483 nt4.36□□□□□ -1.71
PUF3Q07807 HTA2YBL003C 399 nt4.36□□□□□ -1.71
PUF3Q07807 YBL039W-BYBL039W-B 180 nt4.36□□□□□ -1.71
PUF3Q07807 YNL170WYNL170W 396 nt4.36□□□□□ -1.71
PUF3Q07807 VAC7YNL054W 3498 nt4.36□□□□□ -1.71
PUF3Q07807 BI4Q0120 1917 nt4.36□□□□□ -1.71
PUF3Q07807 LYS2YBR115C 4179 nt4.36□□□□□ -1.71
PUF3Q07807 PMC1YGL006W 3522 nt4.35□□□□□ -1.71
PUF3Q07807 MSK1YNL073W 1731 nt4.35□□□□□ -1.71 RIP-Chip
PUF3Q07807 TEL1YBL088C 8364 nt4.35□□□□□ -1.71
PUF3Q07807 BRE4YDL231C 3378 nt4.35□□□□□ -1.71
PUF3Q07807 NDT80YHR124W 1884 nt4.35□□□□□ -1.71
PUF3Q07807 CPR5YDR304C 678 nt4.35□□□□□ -1.71
PUF3Q07807 YGR151CYGR151C 336 nt4.35□□□□□ -1.71
PUF3Q07807 YHL034W-AYHL034W-A 462 nt4.35□□□□□ -1.71
PUF3Q07807 TCD1YHR003C 1290 nt4.35□□□□□ -1.71
PUF3Q07807 RGI2YIL057C 495 nt4.35□□□□□ -1.71
PUF3Q07807 YAL037WYAL037W 804 nt4.35□□□□□ -1.71
PUF3Q07807 RMP1YLR145W 606 nt4.35□□□□□ -1.71
PUF3Q07807 UBC7YMR022W 498 nt4.35□□□□□ -1.71
PUF3Q07807 TLC1TLC1 1301 nt4.35□□□□□ -1.71
PUF3Q07807 DSL1YNL258C 2265 nt4.35□□□□□ -1.71
PUF3Q07807 YGR117CYGR117C 1431 nt4.35□□□□□ -1.71
PUF3Q07807 YDR262WYDR262W 819 nt4.34□□□□□ -1.71
PUF3Q07807 YGL152CYGL152C 678 nt4.34□□□□□ -1.71
PUF3Q07807 YGL188C-AYGL188C-A 141 nt4.34□□□□□ -1.71
PUF3Q07807 FMC1YIL098C 468 nt4.34□□□□□ -1.71 RIP-Chip
PUF3Q07807 RPS16AYMR143W 432 nt4.34□□□□□ -1.71
PUF3Q07807 MRPL50YNR022C 420 nt4.34□□□□□ -1.71 RIP-Chip
PUF3Q07807 BIL1YOR304C-A 231 nt4.34□□□□□ -1.71
PUF3Q07807 DGK1YOR311C 873 nt4.34□□□□□ -1.71
PUF3Q07807 TGL3YMR313C 1929 nt4.34□□□□□ -1.71
PUF3Q07807 TRF5YNL299W 1929 nt4.34□□□□□ -1.71
PUF3Q07807 OPT2YPR194C 2634 nt4.34□□□□□ -1.72
PUF3Q07807 YOR022CYOR022C 2148 nt4.33□□□□□ -1.72
PUF3Q07807 CTM1YHR109W 1758 nt4.33□□□□□ -1.72 RIP-Chip
PUF3Q07807 CTR86YCR054C 1692 nt4.33□□□□□ -1.72
PUF3Q07807 VPS73YGL104C 1461 nt4.33□□□□□ -1.72
PUF3Q07807 DPB4YDR121W 591 nt4.33□□□□□ -1.72
PUF3Q07807 YDR194W-AYDR194W-A 153 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms