Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 FMN1YDR236C 657 nt2.53□□□□□ -2
RAD3P06839 PRE4YFR050C 801 nt2.53□□□□□ -2
RAD3P06839 YGR168CYGR168C 1131 nt2.53□□□□□ -2
RAD3P06839 YIL102C-AYIL102C-A 228 nt2.53□□□□□ -2
RAD3P06839 YJL169WYJL169W 369 nt2.53□□□□□ -2
RAD3P06839 YKL070WYKL070W 510 nt2.53□□□□□ -2
RAD3P06839 YOL166CYOL166C 339 nt2.53□□□□□ -2
RAD3P06839 RRG8YPR116W 834 nt2.53□□□□□ -2
RAD3P06839 CTP1YBR291C 900 nt2.53□□□□□ -2
RAD3P06839 VTC3YPL019C 2508 nt2.53□□□□□ -2
RAD3P06839 OSW7YFR039C 1533 nt2.52□□□□□ -2.01
RAD3P06839 SEN54YPL083C 1404 nt2.52□□□□□ -2.01
RAD3P06839 YNR066CYNR066C 1311 nt2.52□□□□□ -2.01
RAD3P06839 SSN2YDR443C 4263 nt2.52□□□□□ -2.01
RAD3P06839 YNL171CYNL171C 369 nt2.52□□□□□ -2.01
RAD3P06839 TSR4YOL022C 1227 nt2.52□□□□□ -2.01
RAD3P06839 RRD2YPL152W 1077 nt2.52□□□□□ -2.01
RAD3P06839 IRC8YJL051W 2469 nt2.52□□□□□ -2.01
RAD3P06839 DUG2YBR281C 2637 nt2.52□□□□□ -2.01
RAD3P06839 VHR1YIL056W 1923 nt2.51□□□□□ -2.01
RAD3P06839 MFA1YDR461W 111 nt2.51□□□□□ -2.01
RAD3P06839 YHR052W-AYHR052W-A 195 nt2.51□□□□□ -2.01
RAD3P06839 YHR054W-AYHR054W-A 195 nt2.51□□□□□ -2.01
RAD3P06839 SRL3YKR091W 741 nt2.51□□□□□ -2.01
RAD3P06839 RIF2YLR453C 1188 nt2.51□□□□□ -2.01
RAD3P06839 ATG16YMR159C 453 nt2.51□□□□□ -2.01
RAD3P06839 ERV15YBR210W 429 nt2.51□□□□□ -2.01
RAD3P06839 PSD2YGR170W 3417 nt2.51□□□□□ -2.01
RAD3P06839 TOP2YNL088W 4287 nt2.5□□□□□ -2.01
RAD3P06839 RPL13AYDL082W 600 nt2.5□□□□□ -2.01
RAD3P06839 AI3Q0060 1248 nt2.5□□□□□ -2.01
RAD3P06839 DIG2YDR480W 972 nt2.5□□□□□ -2.01
RAD3P06839 AYR1YIL124W 894 nt2.5□□□□□ -2.01
RAD3P06839 YAL034C-BYAL034C-B 354 nt2.5□□□□□ -2.01
RAD3P06839 IZH4YOL101C 939 nt2.5□□□□□ -2.01
RAD3P06839 KAR4YCL055W 1008 nt2.5□□□□□ -2.01
RAD3P06839 URK1YNR012W 1506 nt2.5□□□□□ -2.01
RAD3P06839 STI1YOR027W 1770 nt2.5□□□□□ -2.01
RAD3P06839 AI4Q0065 1671 nt2.5□□□□□ -2.01
RAD3P06839 YDR131CYDR131C 1671 nt2.5□□□□□ -2.01
RAD3P06839 YNL193WYNL193W 1677 nt2.5□□□□□ -2.01
RAD3P06839 CDC5YMR001C 2118 nt2.5□□□□□ -2.01
RAD3P06839 ORC2YBR060C 1863 nt2.5□□□□□ -2.01
RAD3P06839 YDR061WYDR061W 1620 nt2.5□□□□□ -2.01
RAD3P06839 DNF1YER166W 4716 nt2.49□□□□□ -2.01
RAD3P06839 ERV1YGR029W 570 nt2.49□□□□□ -2.01
RAD3P06839 PSY1YKL076C 384 nt2.49□□□□□ -2.01
RAD3P06839 YKL165C-AYKL165C-A 234 nt2.49□□□□□ -2.01
RAD3P06839 RPL6BYLR448W 531 nt2.49□□□□□ -2.01
RAD3P06839 ADI1YMR009W 540 nt2.49□□□□□ -2.01
RAD3P06839 YOR097CYOR097C 528 nt2.49□□□□□ -2.01
RAD3P06839 MUB1YMR100W 1863 nt2.49□□□□□ -2.01
RAD3P06839 ARP9YMR033W 1404 nt2.49□□□□□ -2.01
RAD3P06839 FIR1YER032W 2631 nt2.49□□□□□ -2.01
RAD3P06839 PTP3YER075C 2787 nt2.49□□□□□ -2.01
RAD3P06839 STE11YLR362W 2154 nt2.49□□□□□ -2.01
RAD3P06839 IPI3YNL182C 1668 nt2.48□□□□□ -2.01
RAD3P06839 SUL1YBR294W 2580 nt2.48□□□□□ -2.01
RAD3P06839 HLR1YDR528W 1272 nt2.48□□□□□ -2.01
RAD3P06839 ERG28YER044C 447 nt2.48□□□□□ -2.01
RAD3P06839 PPE1YHR075C 1203 nt2.48□□□□□ -2.01
RAD3P06839 YHR182C-AYHR182C-A 474 nt2.48□□□□□ -2.01
RAD3P06839 PFS1YHR185C 714 nt2.48□□□□□ -2.01
RAD3P06839 GSP1YLR293C 660 nt2.48□□□□□ -2.01
RAD3P06839 TAE2YPL009C 3117 nt2.48□□□□□ -2.01
RAD3P06839 REV3YPL167C 4515 nt2.47□□□□□ -2.01
RAD3P06839 TIM11YDR322C-A 291 nt2.47□□□□□ -2.01
RAD3P06839 GET1YGL020C 708 nt2.47□□□□□ -2.01
RAD3P06839 VEL1YGL258W 621 nt2.47□□□□□ -2.01
RAD3P06839 RSR1YGR152C 819 nt2.47□□□□□ -2.01
RAD3P06839 TDA10YGR205W 873 nt2.47□□□□□ -2.01
RAD3P06839 NNF1YJR112W 606 nt2.47□□□□□ -2.01
RAD3P06839 YAL037WYAL037W 804 nt2.47□□□□□ -2.01
RAD3P06839 YLR412C-AYLR412C-A 207 nt2.47□□□□□ -2.01
RAD3P06839 PEX15YOL044W 1152 nt2.47□□□□□ -2.01
RAD3P06839 YOR050CYOR050C 348 nt2.47□□□□□ -2.01
RAD3P06839 GRX7YBR014C 612 nt2.47□□□□□ -2.01
RAD3P06839 MCD1YDL003W 1701 nt2.47□□□□□ -2.01
RAD3P06839 TFB1YDR311W 1929 nt2.46□□□□□ -2.02
RAD3P06839 YIR036W-AYIR036W-A 402 nt2.46□□□□□ -2.02
RAD3P06839 YLR163W-AYLR163W-A 114 nt2.46□□□□□ -2.02
RAD3P06839 YMR306C-AYMR306C-A 390 nt2.46□□□□□ -2.02
RAD3P06839 GCY1YOR120W 939 nt2.46□□□□□ -2.02
RAD3P06839 TRS130YMR218C 3309 nt2.46□□□□□ -2.02
RAD3P06839 YKL075CYKL075C 1353 nt2.46□□□□□ -2.02
RAD3P06839 PDS5YMR076C 3834 nt2.45□□□□□ -2.02
RAD3P06839 RLI1YDR091C 1827 nt2.45□□□□□ -2.02
RAD3P06839 SMC6YLR383W 3345 nt2.45□□□□□ -2.02
RAD3P06839 YFH7YFR007W 1062 nt2.45□□□□□ -2.02
RAD3P06839 DSE2YHR143W 978 nt2.45□□□□□ -2.02
RAD3P06839 SFT1YKL006C-A 294 nt2.45□□□□□ -2.02
RAD3P06839 SRT1YMR101C 1032 nt2.45□□□□□ -2.02
RAD3P06839 UBP2YOR124C 3819 nt2.45□□□□□ -2.02
RAD3P06839 EMI1YDR512C 564 nt2.44□□□□□ -2.02
RAD3P06839 ERG25YGR060W 930 nt2.44□□□□□ -2.02
RAD3P06839 PAU14YIL176C 363 nt2.44□□□□□ -2.02
RAD3P06839 PAU1YJL223C 363 nt2.44□□□□□ -2.02
RAD3P06839 MET14YKL001C 609 nt2.44□□□□□ -2.02
RAD3P06839 END3YNL084C 1050 nt2.44□□□□□ -2.02
RAD3P06839 SSD1YDR293C 3753 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 81.7 ms