Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC099791.2-201ENST00000605725 427 ntBASIC14.23□□□□□ -0.13
NDUFA1O15239 AL031602.1-201ENST00000633169 911 ntBASIC14.23□□□□□ -0.13
NDUFA1O15239 AL035685.1-201ENST00000636663 812 ntBASIC14.23□□□□□ -0.13
NDUFA1O15239 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA1O15239 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFA1O15239 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA1O15239 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFA1O15239 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA1O15239 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA1O15239 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA1O15239 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NDUFA1O15239 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 AC006455.2-201ENST00000429931 906 ntBASIC14.22□□□□□ -0.13
NDUFA1O15239 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA1O15239 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NDUFA1O15239 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.22□□□□□ -0.13
NDUFA1O15239 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFA1O15239 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA1O15239 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFA1O15239 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
NDUFA1O15239 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
NDUFA1O15239 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFA1O15239 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA1O15239 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NDUFA1O15239 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFA1O15239 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.21□□□□□ -0.13
NDUFA1O15239 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA1O15239 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.21□□□□□ -0.13
NDUFA1O15239 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.21□□□□□ -0.13
NDUFA1O15239 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA1O15239 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA1O15239 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.21□□□□□ -0.14
NDUFA1O15239 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA1O15239 AFG3L1P-217ENST00000557444 2447 ntBASIC14.21□□□□□ -0.14
NDUFA1O15239 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NDUFA1O15239 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA1O15239 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA1O15239 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA1O15239 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA1O15239 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA1O15239 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA1O15239 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.2□□□□□ -0.14
NDUFA1O15239 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NDUFA1O15239 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 MIR3621-201ENST00000580529 85 ntBASIC14.2□□□□□ -0.14
NDUFA1O15239 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 HCG11-201ENST00000411553 5696 ntBASIC14.2□□□□□ -0.14
NDUFA1O15239 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NDUFA1O15239 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA1O15239 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.2□□□□□ -0.14
NDUFA1O15239 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NDUFA1O15239 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA1O15239 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA1O15239 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA1O15239 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NDUFA1O15239 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA1O15239 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA1O15239 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms