Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV23-1A0A0A0MS06 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 AC053503.5-201ENST00000601508 636 ntBASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.53■□□□□ 0.4
TRBV23-1A0A0A0MS06 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 EEF1DP3-203ENST00000566025 782 ntBASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.52■□□□□ 0.4
TRBV23-1A0A0A0MS06 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV23-1A0A0A0MS06 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV23-1A0A0A0MS06 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV23-1A0A0A0MS06 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV23-1A0A0A0MS06 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV23-1A0A0A0MS06 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 KRT19P1-201ENST00000405746 1186 ntBASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV23-1A0A0A0MS06 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 NTF6G-201ENST00000591094 616 ntBASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 AC010542.4-201ENST00000563151 1910 ntBASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV23-1A0A0A0MS06 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms