Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SH3TC1Q8TE82 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SH3TC1Q8TE82 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 AC242852.2-201ENST00000615738 1807 ntBASIC26.16■■□□□ 1.78
SH3TC1Q8TE82 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 PRORSD1P-201ENST00000295112 541 ntBASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 LSM12P1-201ENST00000411836 588 ntBASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SH3TC1Q8TE82 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 AL355472.2-201ENST00000422958 438 ntBASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 CDV3P1-201ENST00000471403 739 ntBASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
SH3TC1Q8TE82 KRT17P1-201ENST00000399211 1546 ntBASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 ECEL1P1-201ENST00000373592 1742 ntBASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 ESRRAP1-201ENST00000400596 1257 ntBASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 AC100791.3-201ENST00000617619 330 ntBASIC26.14■■□□□ 1.77
SH3TC1Q8TE82 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 AL117328.2-201ENST00000624617 1940 ntBASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.13■■□□□ 1.77
SH3TC1Q8TE82 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SH3TC1Q8TE82 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SH3TC1Q8TE82 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.12■■□□□ 1.77
SH3TC1Q8TE82 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SH3TC1Q8TE82 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms