Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AC068338.2-201ENST00000563278 1430 ntBASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 AC061975.6-201ENST00000579045 1553 ntBASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 AC142086.2-201ENST00000569753 217 ntBASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.27■□□□□ 0.84
SNAP47Q5SQN1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SNAP47Q5SQN1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNAP47Q5SQN1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNAP47Q5SQN1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
SNAP47Q5SQN1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNAP47Q5SQN1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 AC026471.6-201ENST00000622954 1905 ntBASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 CD99P1-205ENST00000527459 561 ntBASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 AL121603.2-201ENST00000557373 2117 ntBASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.26■□□□□ 0.83
SNAP47Q5SQN1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 AC133552.2-202ENST00000575694 574 ntBASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 AC008694.1-202ENST00000636953 945 ntBASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.25■□□□□ 0.83
SNAP47Q5SQN1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNAP47Q5SQN1 AC127496.7-201ENST00000625110 1798 ntBASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.23■□□□□ 0.83
SNAP47Q5SQN1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms