Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 VPS63YLR261C 327 nt4.49□□□□□ -1.69
PUF3Q07807 VTI1YMR197C 654 nt4.49□□□□□ -1.69
PUF3Q07807 STE5YDR103W 2754 nt4.49□□□□□ -1.69
PUF3Q07807 LYS9YNR050C 1341 nt4.48□□□□□ -1.69
PUF3Q07807 HOYDL227C 1761 nt4.48□□□□□ -1.69
PUF3Q07807 STV1YMR054W 2673 nt4.48□□□□□ -1.69
PUF3Q07807 PMI40YER003C 1290 nt4.48□□□□□ -1.69
PUF3Q07807 PCL5YHR071W 690 nt4.48□□□□□ -1.69
PUF3Q07807 SAE3YHR079C-A 276 nt4.48□□□□□ -1.69
PUF3Q07807 YIL024CYIL024C 570 nt4.48□□□□□ -1.69
PUF3Q07807 LSM8YJR022W 330 nt4.48□□□□□ -1.69
PUF3Q07807 NNF1YJR112W 606 nt4.48□□□□□ -1.69
PUF3Q07807 YKL033W-AYKL033W-A 711 nt4.48□□□□□ -1.69
PUF3Q07807 YLR031WYLR031W 561 nt4.48□□□□□ -1.69
PUF3Q07807 ERP4YOR016C 624 nt4.48□□□□□ -1.69
PUF3Q07807 YAR1YPL239W 603 nt4.48□□□□□ -1.69
PUF3Q07807 MBA1YBR185C 837 nt4.48□□□□□ -1.69 RIP-Chip
PUF3Q07807 SHG1YBR258C 429 nt4.48□□□□□ -1.69
PUF3Q07807 YPS7YDR349C 1791 nt4.48□□□□□ -1.69
PUF3Q07807 TPO5YKL174C 1857 nt4.47□□□□□ -1.69
PUF3Q07807 AHC2YCR082W 387 nt4.47□□□□□ -1.69
PUF3Q07807 PRP11YDL043C 801 nt4.47□□□□□ -1.69
PUF3Q07807 snR80snR80 171 nt4.47□□□□□ -1.69
PUF3Q07807 YRB1YDR002W 606 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)CtQ(UUG)C 72 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)D1tQ(UUG)D1 72 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)D2tQ(UUG)D2 72 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)D3tQ(UUG)D3 72 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)E1tQ(UUG)E1 72 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)HtQ(UUG)H 72 nt4.47□□□□□ -1.69
PUF3Q07807 tQ(UUG)LtQ(UUG)L 72 nt4.47□□□□□ -1.69
PUF3Q07807 YIL171WYIL171W 330 nt4.47□□□□□ -1.69
PUF3Q07807 PFD1YJL179W 330 nt4.47□□□□□ -1.69
PUF3Q07807 RPL39YJL189W 156 nt4.47□□□□□ -1.69
PUF3Q07807 ICY1YMR195W 384 nt4.47□□□□□ -1.69
PUF3Q07807 PHM7YOL084W 2976 nt4.47□□□□□ -1.69
PUF3Q07807 STP1YDR463W 1560 nt4.47□□□□□ -1.69
PUF3Q07807 PEX30YLR324W 1572 nt4.47□□□□□ -1.69
PUF3Q07807 THI7YLR237W 1797 nt4.47□□□□□ -1.69
PUF3Q07807 PRP3YDR473C 1410 nt4.46□□□□□ -1.69
PUF3Q07807 AEP3YPL005W 1821 nt4.46□□□□□ -1.69
PUF3Q07807 GLN4YOR168W 2430 nt4.46□□□□□ -1.69
PUF3Q07807 RPG1YBR079C 2895 nt4.46□□□□□ -1.7
PUF3Q07807 PPQ1YPL179W 1650 nt4.46□□□□□ -1.7
PUF3Q07807 snR59snR59 78 nt4.46□□□□□ -1.7
PUF3Q07807 YDL009CYDL009C 324 nt4.46□□□□□ -1.7
PUF3Q07807 YDR102CYDR102C 333 nt4.46□□□□□ -1.7
PUF3Q07807 YER038W-AYER038W-A 381 nt4.46□□□□□ -1.7
PUF3Q07807 ISF1YMR081C 1017 nt4.46□□□□□ -1.7
PUF3Q07807 RAD14YMR201C 1116 nt4.46□□□□□ -1.7 RIP-Chip
PUF3Q07807 TMC1YOR052C 453 nt4.46□□□□□ -1.7
PUF3Q07807 DCS2YOR173W 1062 nt4.46□□□□□ -1.7
PUF3Q07807 FRM2YCL026C-A 582 nt4.46□□□□□ -1.7
PUF3Q07807 YLR152CYLR152C 1731 nt4.46□□□□□ -1.7
PUF3Q07807 SPE1YKL184W 1401 nt4.46□□□□□ -1.7
PUF3Q07807 BCH2YKR027W 2298 nt4.46□□□□□ -1.7
PUF3Q07807 SEC27YGL137W 2670 nt4.45□□□□□ -1.7
PUF3Q07807 RPS14AYCR031C 414 nt4.45□□□□□ -1.7
PUF3Q07807 THI13YDL244W 1023 nt4.45□□□□□ -1.7
PUF3Q07807 BSC2YDR275W 708 nt4.45□□□□□ -1.7
PUF3Q07807 AST2YER101C 1293 nt4.45□□□□□ -1.7
PUF3Q07807 CGR1YGL029W 363 nt4.45□□□□□ -1.7
PUF3Q07807 YGR053CYGR053C 852 nt4.45□□□□□ -1.7 RIP-Chip
PUF3Q07807 VOA1YGR106C 798 nt4.45□□□□□ -1.7
PUF3Q07807 RPS24BYIL069C 408 nt4.45□□□□□ -1.7
PUF3Q07807 YLR364C-AYLR364C-A 123 nt4.45□□□□□ -1.7
PUF3Q07807 RIM9YMR063W 720 nt4.45□□□□□ -1.7 RIP-Chip
PUF3Q07807 YOR170WYOR170W 306 nt4.45□□□□□ -1.7
PUF3Q07807 YPL152W-AYPL152W-A 99 nt4.45□□□□□ -1.7
PUF3Q07807 YPR099CYPR099C 357 nt4.45□□□□□ -1.7 RIP-Chip
PUF3Q07807 snR36snR36 182 nt4.45□□□□□ -1.7
PUF3Q07807 OM14YBR230C 405 nt4.45□□□□□ -1.7
PUF3Q07807 SRS2YJL092W 3525 nt4.45□□□□□ -1.7
PUF3Q07807 VBA2YBR293W 1425 nt4.45□□□□□ -1.7 RIP-Chip
PUF3Q07807 YPL260WYPL260W 1656 nt4.45□□□□□ -1.7
PUF3Q07807 SHE4YOR035C 2370 nt4.45□□□□□ -1.7
PUF3Q07807 RNR4YGR180C 1038 nt4.44□□□□□ -1.7
PUF3Q07807 EFB1YAL003W 621 nt4.44□□□□□ -1.7
PUF3Q07807 YAL004WYAL004W 648 nt4.44□□□□□ -1.7
PUF3Q07807 YJL015CYJL015C 285 nt4.44□□□□□ -1.7
PUF3Q07807 CNB1YKL190W 528 nt4.44□□□□□ -1.7
PUF3Q07807 YOR082CYOR082C 342 nt4.44□□□□□ -1.7
PUF3Q07807 PEP7YDR323C 1548 nt4.44□□□□□ -1.7
PUF3Q07807 PDR5YOR153W 4536 nt4.44□□□□□ -1.7 RIP-Chip
PUF3Q07807 AVT7YIL088C 1473 nt4.43□□□□□ -1.7
PUF3Q07807 NCS2YNL119W 1482 nt4.43□□□□□ -1.7
PUF3Q07807 PHO87YCR037C 2772 nt4.43□□□□□ -1.7
PUF3Q07807 APP1YNL094W 1764 nt4.43□□□□□ -1.7 RIP-Chip
PUF3Q07807 BRE5YNR051C 1548 nt4.43□□□□□ -1.7
PUF3Q07807 MON1YGL124C 1935 nt4.43□□□□□ -1.7
PUF3Q07807 YDL094CYDL094C 510 nt4.43□□□□□ -1.7
PUF3Q07807 YDR537CYDR537C 606 nt4.43□□□□□ -1.7
PUF3Q07807 RPL1BYGL135W 654 nt4.43□□□□□ -1.7
PUF3Q07807 SUI1YNL244C 327 nt4.43□□□□□ -1.7
PUF3Q07807 RPL1AYPL220W 654 nt4.43□□□□□ -1.7
PUF3Q07807 UBP10YNL186W 2379 nt4.42□□□□□ -1.7
PUF3Q07807 SSF1YHR066W 1362 nt4.42□□□□□ -1.7
PUF3Q07807 LYP1YNL268W 1836 nt4.42□□□□□ -1.7
PUF3Q07807 PUT2YHR037W 1728 nt4.42□□□□□ -1.7
PUF3Q07807 RDN5-1RDN5-1 121 nt4.42□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms