Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 ATX1YNL259C 222 nt3.13□□□□□ -1.91
SEF1P34228 YPR147CYPR147C 915 nt3.13□□□□□ -1.91
SEF1P34228 NOP12YOL041C 1380 nt3.12□□□□□ -1.91
SEF1P34228 RRP5YMR229C 5190 nt3.12□□□□□ -1.91
SEF1P34228 TAF1YGR274C 3201 nt3.12□□□□□ -1.91
SEF1P34228 RAD2YGR258C 3096 nt3.12□□□□□ -1.91
SEF1P34228 MRPL11YDL202W 750 nt3.12□□□□□ -1.91
SEF1P34228 RSM24YDR175C 960 nt3.12□□□□□ -1.91
SEF1P34228 YDR262WYDR262W 819 nt3.12□□□□□ -1.91
SEF1P34228 YDR509WYDR509W 348 nt3.12□□□□□ -1.91
SEF1P34228 YFL012W-AYFL012W-A 375 nt3.12□□□□□ -1.91
SEF1P34228 SNO3YFL060C 669 nt3.12□□□□□ -1.91
SEF1P34228 MST27YGL051W 705 nt3.12□□□□□ -1.91
SEF1P34228 MST28YAR033W 705 nt3.12□□□□□ -1.91
SEF1P34228 YMR122W-AYMR122W-A 255 nt3.12□□□□□ -1.91
SEF1P34228 SNO2YNL334C 669 nt3.12□□□□□ -1.91
SEF1P34228 TIR2YOR010C 756 nt3.12□□□□□ -1.91
SEF1P34228 YRO2YBR054W 1035 nt3.12□□□□□ -1.91
SEF1P34228 CUR1YPR158W 759 nt3.12□□□□□ -1.91
SEF1P34228 MBA1YBR185C 837 nt3.12□□□□□ -1.91
SEF1P34228 RSC1YGR056W 2787 nt3.12□□□□□ -1.91
SEF1P34228 SPP382YLR424W 2127 nt3.11□□□□□ -1.91
SEF1P34228 ENA5YDR038C 3276 nt3.11□□□□□ -1.91
SEF1P34228 ENA2YDR039C 3276 nt3.11□□□□□ -1.91
SEF1P34228 ENA1YDR040C 3276 nt3.11□□□□□ -1.91
SEF1P34228 YCR045W-AYCR045W-A 351 nt3.11□□□□□ -1.91
SEF1P34228 tF(GAA)DtF(GAA)D 73 nt3.11□□□□□ -1.91
SEF1P34228 tF(GAA)NtF(GAA)N 73 nt3.11□□□□□ -1.91
SEF1P34228 CDC26YFR036W 375 nt3.11□□□□□ -1.91
SEF1P34228 tV(CAC)DtV(CAC)D 73 nt3.11□□□□□ -1.91
SEF1P34228 tV(CAC)HtV(CAC)H 73 nt3.11□□□□□ -1.91
SEF1P34228 PRP21YJL203W 843 nt3.11□□□□□ -1.91
SEF1P34228 ENV10YLR065C 546 nt3.11□□□□□ -1.91
SEF1P34228 YLR154C-HYLR154C-H 132 nt3.11□□□□□ -1.91
SEF1P34228 YLR156C-AYLR156C-A 132 nt3.11□□□□□ -1.91
SEF1P34228 YLR157C-CYLR157C-C 132 nt3.11□□□□□ -1.91
SEF1P34228 YLR159C-AYLR159C-A 132 nt3.11□□□□□ -1.91
SEF1P34228 CSI1YMR025W 888 nt3.11□□□□□ -1.91
SEF1P34228 YMR141CYMR141C 309 nt3.11□□□□□ -1.91
SEF1P34228 PAI3YMR174C 207 nt3.11□□□□□ -1.91
SEF1P34228 YNR063WYNR063W 1824 nt3.11□□□□□ -1.91
SEF1P34228 NSA1YGL111W 1392 nt3.11□□□□□ -1.91
SEF1P34228 DOA4YDR069C 2781 nt3.11□□□□□ -1.91
SEF1P34228 PDS5YMR076C 3834 nt3.1□□□□□ -1.91
SEF1P34228 SMC3YJL074C 3693 nt3.1□□□□□ -1.91
SEF1P34228 CBP2YHL038C 1893 nt3.1□□□□□ -1.91
SEF1P34228 YCT1YLL055W 1596 nt3.1□□□□□ -1.91
SEF1P34228 SAE2YGL175C 1038 nt3.1□□□□□ -1.91
SEF1P34228 PRP38YGR075C 729 nt3.1□□□□□ -1.91
SEF1P34228 RPL11BYGR085C 525 nt3.1□□□□□ -1.91
SEF1P34228 EFG1YGR271C-A 702 nt3.1□□□□□ -1.91
SEF1P34228 PCL5YHR071W 690 nt3.1□□□□□ -1.91
SEF1P34228 YIR040CYIR040C 333 nt3.1□□□□□ -1.91
SEF1P34228 ECM4YKR076W 1113 nt3.1□□□□□ -1.91
SEF1P34228 APC9YLR102C 798 nt3.1□□□□□ -1.91
SEF1P34228 ATG38YLR211C 681 nt3.1□□□□□ -1.91
SEF1P34228 RPS28BYLR264W 204 nt3.1□□□□□ -1.91
SEF1P34228 YOL029CYOL029C 606 nt3.1□□□□□ -1.91
SEF1P34228 SGT1YOR057W 1188 nt3.1□□□□□ -1.91
SEF1P34228 YPL142CYPL142C 318 nt3.1□□□□□ -1.91
SEF1P34228 RPL11AYPR102C 525 nt3.1□□□□□ -1.91
SEF1P34228 BNI4YNL233W 2679 nt3.1□□□□□ -1.91
SEF1P34228 PBP4YDL053C 558 nt3.09□□□□□ -1.91
SEF1P34228 NTF2YER009W 378 nt3.09□□□□□ -1.91
SEF1P34228 YIP5YGL161C 933 nt3.09□□□□□ -1.91
SEF1P34228 DLS1YJL065C 504 nt3.09□□□□□ -1.91
SEF1P34228 ECM9YKR004C 1134 nt3.09□□□□□ -1.91
SEF1P34228 YLR076CYLR076C 423 nt3.09□□□□□ -1.91
SEF1P34228 ARC18YLR370C 537 nt3.09□□□□□ -1.91
SEF1P34228 ADI1YMR009W 540 nt3.09□□□□□ -1.91
SEF1P34228 AIM4YBR194W 372 nt3.09□□□□□ -1.91
SEF1P34228 MAK5YBR142W 2322 nt3.09□□□□□ -1.92
SEF1P34228 TOM70YNL121C 1854 nt3.09□□□□□ -1.92
SEF1P34228 TFC1YBR123C 1950 nt3.09□□□□□ -1.92
SEF1P34228 STT4YLR305C 5703 nt3.08□□□□□ -1.92
SEF1P34228 CDH1YGL003C 1701 nt3.08□□□□□ -1.92
SEF1P34228 YJL169WYJL169W 369 nt3.08□□□□□ -1.92
SEF1P34228 MBB1YJL199C 327 nt3.08□□□□□ -1.92
SEF1P34228 YAL031W-AYAL031W-A 309 nt3.08□□□□□ -1.92
SEF1P34228 SRL3YKR091W 741 nt3.08□□□□□ -1.92
SEF1P34228 Q0017Q0017 162 nt3.08□□□□□ -1.92
SEF1P34228 RPN1YHR027C 2982 nt3.08□□□□□ -1.92
SEF1P34228 TCP1YDR212W 1680 nt3.08□□□□□ -1.92
SEF1P34228 CWH41YGL027C 2502 nt3.08□□□□□ -1.92
SEF1P34228 CIK1YMR198W 1785 nt3.07□□□□□ -1.92
SEF1P34228 TAO3YIL129C 7131 nt3.07□□□□□ -1.92
SEF1P34228 RIM13YMR154C 2184 nt3.07□□□□□ -1.92
SEF1P34228 RPA135YPR010C 3612 nt3.07□□□□□ -1.92
SEF1P34228 YER066C-AYER066C-A 501 nt3.07□□□□□ -1.92
SEF1P34228 RPS8BYER102W 603 nt3.07□□□□□ -1.92
SEF1P34228 NSA2YER126C 786 nt3.07□□□□□ -1.92
SEF1P34228 LST7YGR057C 729 nt3.07□□□□□ -1.92
SEF1P34228 PEX18YHR160C 852 nt3.07□□□□□ -1.92
SEF1P34228 RPL17AYKL180W 555 nt3.07□□□□□ -1.92
SEF1P34228 RPS8AYBL072C 603 nt3.07□□□□□ -1.92
SEF1P34228 CSI2YOL007C 1026 nt3.07□□□□□ -1.92
SEF1P34228 MSR1YHR091C 1932 nt3.07□□□□□ -1.92
SEF1P34228 YDL163WYDL163W 303 nt3.06□□□□□ -1.92
SEF1P34228 DTD1YDL219W 453 nt3.06□□□□□ -1.92
SEF1P34228 TMA20YER007C-A 546 nt3.06□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 33.1 ms