Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.06■■□□□ 1.28
COL1A2P08123 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.06■■□□□ 1.28
COL1A2P08123 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
COL1A2P08123 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.05■■□□□ 1.28
COL1A2P08123 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.05■■□□□ 1.28
COL1A2P08123 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.05■■□□□ 1.28
COL1A2P08123 AC007322.3-201ENST00000426526 701 ntBASIC23.05■■□□□ 1.28
COL1A2P08123 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL1A2P08123 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.05■■□□□ 1.28
COL1A2P08123 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.05■■□□□ 1.28
COL1A2P08123 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.05■■□□□ 1.28
COL1A2P08123 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A2P08123 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
COL1A2P08123 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.04■■□□□ 1.28
COL1A2P08123 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A2P08123 AC091874.3-201ENST00000512672 1195 ntBASIC23.04■■□□□ 1.28
COL1A2P08123 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.04■■□□□ 1.28
COL1A2P08123 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.04■■□□□ 1.28
COL1A2P08123 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A2P08123 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
COL1A2P08123 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A2P08123 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 AC083880.1-201ENST00000608266 535 ntBASIC23.03■■□□□ 1.28
COL1A2P08123 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
COL1A2P08123 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A2P08123 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
COL1A2P08123 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL1A2P08123 DUSP5P2-201ENST00000426873 1033 ntBASIC23.02■■□□□ 1.28
COL1A2P08123 AC097658.1-201ENST00000475555 843 ntBASIC23.02■■□□□ 1.28
COL1A2P08123 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.02■■□□□ 1.28
COL1A2P08123 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.02■■□□□ 1.28
COL1A2P08123 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.02■■□□□ 1.28
COL1A2P08123 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.02■■□□□ 1.28
COL1A2P08123 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
COL1A2P08123 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A2P08123 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL1A2P08123 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.01■■□□□ 1.27
COL1A2P08123 TSPY20P-201ENST00000450910 630 ntBASIC23.01■■□□□ 1.27
COL1A2P08123 MIR4651-201ENST00000582622 73 ntBASIC23.01■■□□□ 1.27
COL1A2P08123 CYP2T3P-201ENST00000601990 817 ntBASIC23.01■■□□□ 1.27
COL1A2P08123 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL1A2P08123 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL1A2P08123 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
COL1A2P08123 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.01■■□□□ 1.27
COL1A2P08123 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL1A2P08123 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
COL1A2P08123 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.01■■□□□ 1.27
COL1A2P08123 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.01■■□□□ 1.27
COL1A2P08123 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.01■■□□□ 1.27
COL1A2P08123 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.01■■□□□ 1.27
COL1A2P08123 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.01■■□□□ 1.27
COL1A2P08123 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL1A2P08123 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.01■■□□□ 1.27
COL1A2P08123 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
COL1A2P08123 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms