Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM1O15116 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.15■□□□□ 0.82
LSM1O15116 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.15■□□□□ 0.82
LSM1O15116 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LSM1O15116 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
LSM1O15116 AC106739.1-201ENST00000617035 715 ntBASIC20.15■□□□□ 0.82
LSM1O15116 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM1O15116 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LSM1O15116 PLK5-205ENST00000642079 1969 ntBASIC20.15■□□□□ 0.82
LSM1O15116 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM1O15116 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LSM1O15116 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LSM1O15116 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
LSM1O15116 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM1O15116 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM1O15116 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LSM1O15116 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.14■□□□□ 0.81
LSM1O15116 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LSM1O15116 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LSM1O15116 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LSM1O15116 AC008406.3-201ENST00000620001 1374 ntBASIC20.14■□□□□ 0.81
LSM1O15116 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.14■□□□□ 0.81
LSM1O15116 PBX2P1-201ENST00000493219 1291 ntBASIC20.14■□□□□ 0.81
LSM1O15116 AP001330.3-201ENST00000520123 633 ntBASIC20.14■□□□□ 0.81
LSM1O15116 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.14■□□□□ 0.81
LSM1O15116 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LSM1O15116 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.14■□□□□ 0.81
LSM1O15116 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM1O15116 AC006128.1-201ENST00000624704 1661 ntBASIC20.13■□□□□ 0.81
LSM1O15116 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM1O15116 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM1O15116 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.13■□□□□ 0.81
LSM1O15116 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LSM1O15116 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM1O15116 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.13■□□□□ 0.81
LSM1O15116 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.13■□□□□ 0.81
LSM1O15116 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LSM1O15116 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM1O15116 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM1O15116 BX005040.4-201ENST00000637145 1518 ntBASIC20.12■□□□□ 0.81
LSM1O15116 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LSM1O15116 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LSM1O15116 EDA-201ENST00000338901 1233 ntBASIC20.12■□□□□ 0.81
LSM1O15116 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.12■□□□□ 0.81
LSM1O15116 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.12■□□□□ 0.81
LSM1O15116 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.12■□□□□ 0.81
LSM1O15116 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.12■□□□□ 0.81
LSM1O15116 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM1O15116 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LSM1O15116 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LSM1O15116 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.12■□□□□ 0.81
LSM1O15116 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM1O15116 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM1O15116 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LSM1O15116 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.11■□□□□ 0.81
LSM1O15116 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM1O15116 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM1O15116 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM1O15116 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.11■□□□□ 0.81
LSM1O15116 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
LSM1O15116 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.11■□□□□ 0.81
LSM1O15116 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.11■□□□□ 0.81
LSM1O15116 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.11■□□□□ 0.81
LSM1O15116 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM1O15116 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LSM1O15116 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LSM1O15116 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
LSM1O15116 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.1■□□□□ 0.81
LSM1O15116 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LSM1O15116 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
LSM1O15116 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
LSM1O15116 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LSM1O15116 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LSM1O15116 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
LSM1O15116 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.1■□□□□ 0.81
LSM1O15116 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM1O15116 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
LSM1O15116 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms