Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 EAF5YEL018W 840 nt2.3□□□□□ -2.04
TY1B-HO13535 SMX2YFL017W-A 234 nt2.3□□□□□ -2.04
TY1B-HO13535 YHR145CYHR145C 357 nt2.3□□□□□ -2.04
TY1B-HO13535 SWD3YBR175W 948 nt2.3□□□□□ -2.04
TY1B-HO13535 ROM2YLR371W 4071 nt2.3□□□□□ -2.04
TY1B-HO13535 CTF13YMR094W 1437 nt2.29□□□□□ -2.04
TY1B-HO13535 YJR056CYJR056C 711 nt2.29□□□□□ -2.04
TY1B-HO13535 ATG34YOL083W 1239 nt2.29□□□□□ -2.04
TY1B-HO13535 IRE1YHR079C 3348 nt2.29□□□□□ -2.04
TY1B-HO13535 AIM14YGL160W 1713 nt2.29□□□□□ -2.04
TY1B-HO13535 MAK10YEL053C 2202 nt2.28□□□□□ -2.04
TY1B-HO13535 YGR293CYGR293C 462 nt2.28□□□□□ -2.04
TY1B-HO13535 YML094C-AYML094C-A 402 nt2.28□□□□□ -2.04
TY1B-HO13535 RRP7YCL031C 894 nt2.28□□□□□ -2.04
TY1B-HO13535 SIR3YLR442C 2937 nt2.28□□□□□ -2.04
TY1B-HO13535 GNT1YOR320C 1476 nt2.28□□□□□ -2.04
TY1B-HO13535 PRP6YBR055C 2700 nt2.28□□□□□ -2.04
TY1B-HO13535 GPP2YER062C 753 nt2.28□□□□□ -2.04
TY1B-HO13535 HTA2YBL003C 399 nt2.28□□□□□ -2.04
TY1B-HO13535 TOP2YNL088W 4287 nt2.27□□□□□ -2.05
TY1B-HO13535 CSF1YLR087C 8877 nt2.27□□□□□ -2.05
TY1B-HO13535 MGA1YGR249W 1371 nt2.27□□□□□ -2.05
TY1B-HO13535 HPA3YEL066W 540 nt2.27□□□□□ -2.05
TY1B-HO13535 PRP18YGR006W 756 nt2.27□□□□□ -2.05
TY1B-HO13535 PSY3YLR376C 729 nt2.27□□□□□ -2.05
TY1B-HO13535 CFT2YLR115W 2580 nt2.27□□□□□ -2.05
TY1B-HO13535 TMA64YDR117C 1698 nt2.27□□□□□ -2.05
TY1B-HO13535 ORC2YBR060C 1863 nt2.27□□□□□ -2.05
TY1B-HO13535 RIM13YMR154C 2184 nt2.27□□□□□ -2.05
TY1B-HO13535 YOR192C-BYOR192C-B 5313 nt2.26□□□□□ -2.05
TY1B-HO13535 SSN8YNL025C 972 nt2.26□□□□□ -2.05
TY1B-HO13535 ERP3YDL018C 678 nt2.25□□□□□ -2.05
TY1B-HO13535 YKR011CYKR011C 1062 nt2.25□□□□□ -2.05
TY1B-HO13535 NNT1YLR285W 786 nt2.25□□□□□ -2.05
TY1B-HO13535 YLR462WYLR462W 609 nt2.25□□□□□ -2.05
TY1B-HO13535 YBR090CYBR090C 369 nt2.25□□□□□ -2.05
TY1B-HO13535 CSH1YBR161W 1131 nt2.25□□□□□ -2.05
TY1B-HO13535 SMY2YBR172C 2223 nt2.25□□□□□ -2.05
TY1B-HO13535 YJL113WYJL113W 4647 nt2.25□□□□□ -2.05
TY1B-HO13535 SWA2YDR320C 2007 nt2.24□□□□□ -2.05
TY1B-HO13535 UBP3YER151C 2739 nt2.24□□□□□ -2.05
TY1B-HO13535 AAR2YBL074C 1068 nt2.24□□□□□ -2.05
TY1B-HO13535 CLU1YMR012W 3834 nt2.24□□□□□ -2.05
TY1B-HO13535 YBL029C-AYBL029C-A 285 nt2.23□□□□□ -2.05
TY1B-HO13535 YBL096CYBL096C 309 nt2.23□□□□□ -2.05
TY1B-HO13535 DIA2YOR080W 2199 nt2.23□□□□□ -2.05
TY1B-HO13535 BNI1YNL271C 5862 nt2.23□□□□□ -2.05
TY1B-HO13535 YBP1YBR216C 2025 nt2.23□□□□□ -2.05
TY1B-HO13535 SLX9YGR081C 633 nt2.23□□□□□ -2.05
TY1B-HO13535 RRT7YLL030C 342 nt2.23□□□□□ -2.05
TY1B-HO13535 PHR1YOR386W 1698 nt2.23□□□□□ -2.05
TY1B-HO13535 DSN1YIR010W 1731 nt2.22□□□□□ -2.05
TY1B-HO13535 TCM62YBR044C 1719 nt2.22□□□□□ -2.05
TY1B-HO13535 RIX1YHR197W 2292 nt2.22□□□□□ -2.05
TY1B-HO13535 VPS35YJL154C 2835 nt2.22□□□□□ -2.05
TY1B-HO13535 YML003WYML003W 873 nt2.21□□□□□ -2.06
TY1B-HO13535 VPS71YML041C 843 nt2.21□□□□□ -2.06
TY1B-HO13535 PAN2YGL094C 3348 nt2.21□□□□□ -2.06
TY1B-HO13535 BUD3YCL014W 4911 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)E1tH(GUG)E1 72 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)E2tH(GUG)E2 72 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)G1tH(GUG)G1 72 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)G2tH(GUG)G2 72 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)HtH(GUG)H 72 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)KtH(GUG)K 72 nt2.21□□□□□ -2.06
TY1B-HO13535 tH(GUG)MtH(GUG)M 72 nt2.21□□□□□ -2.06
TY1B-HO13535 PIS1YPR113W 663 nt2.21□□□□□ -2.06
TY1B-HO13535 YPR177CYPR177C 372 nt2.21□□□□□ -2.06
TY1B-HO13535 DBP5YOR046C 1449 nt2.2□□□□□ -2.06
TY1B-HO13535 BUR6YER159C 429 nt2.2□□□□□ -2.06
TY1B-HO13535 KXD1YGL079W 657 nt2.2□□□□□ -2.06
TY1B-HO13535 YGR111WYGR111W 1203 nt2.2□□□□□ -2.06
TY1B-HO13535 YIL102CYIL102C 306 nt2.2□□□□□ -2.06
TY1B-HO13535 MTR2YKL186C 555 nt2.2□□□□□ -2.06
TY1B-HO13535 CMR3YPR013C 954 nt2.2□□□□□ -2.06
TY1B-HO13535 MED1YPR070W 1701 nt2.2□□□□□ -2.06
TY1B-HO13535 APM3YBR288C 1452 nt2.2□□□□□ -2.06
TY1B-HO13535 YDR098C-BYDR098C-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YDR210C-DYDR210C-D 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YDR316W-BYDR316W-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YDR365W-BYDR365W-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YER138CYER138C 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YER160CYER160C 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YGR038C-BYGR038C-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YGR161C-DYGR161C-D 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YJR027WYJR027W 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YLR157C-BYLR157C-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YML039WYML039W 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YML045WYML045W 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YMR050CYMR050C 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YOL103W-BYOL103W-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YBR012W-BYBR012W-B 5271 nt2.19□□□□□ -2.06
TY1B-HO13535 YOR142W-BYOR142W-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YPL257W-BYPL257W-B 5268 nt2.19□□□□□ -2.06
TY1B-HO13535 YPR158W-BYPR158W-B 5271 nt2.19□□□□□ -2.06
TY1B-HO13535 TAM41YGR046W 1158 nt2.19□□□□□ -2.06
TY1B-HO13535 YJL015CYJL015C 285 nt2.19□□□□□ -2.06
TY1B-HO13535 MRPL49YJL096W 486 nt2.19□□□□□ -2.06
TY1B-HO13535 RLP7YNL002C 969 nt2.19□□□□□ -2.06
TY1B-HO13535 YKU80YMR106C 1890 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms