Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.13■□□□□ 0.49
SFTPBP07988 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SFTPBP07988 FEM1AP4-201ENST00000443167 1987 ntBASIC18.13■□□□□ 0.49
SFTPBP07988 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.13■□□□□ 0.49
SFTPBP07988 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.12■□□□□ 0.49
SFTPBP07988 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.12■□□□□ 0.49
SFTPBP07988 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SFTPBP07988 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.12■□□□□ 0.49
SFTPBP07988 RARRES2P6-201ENST00000567333 442 ntBASIC18.12■□□□□ 0.49
SFTPBP07988 TSPY26P-201ENST00000476365 1326 ntBASIC18.12■□□□□ 0.49
SFTPBP07988 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SFTPBP07988 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.12■□□□□ 0.49
SFTPBP07988 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
SFTPBP07988 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 IRS3P-201ENST00000223076 1006 ntBASIC18.11■□□□□ 0.49
SFTPBP07988 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.11■□□□□ 0.49
SFTPBP07988 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.11■□□□□ 0.49
SFTPBP07988 AL034346.1-201ENST00000568244 1277 ntBASIC18.11■□□□□ 0.49
SFTPBP07988 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.11■□□□□ 0.49
SFTPBP07988 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SFTPBP07988 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SFTPBP07988 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SFTPBP07988 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SFTPBP07988 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SFTPBP07988 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SFTPBP07988 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.1■□□□□ 0.49
SFTPBP07988 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
SFTPBP07988 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.1■□□□□ 0.49
SFTPBP07988 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SFTPBP07988 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SFTPBP07988 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.09■□□□□ 0.49
SFTPBP07988 AC003102.1-202ENST00000563394 1796 ntBASIC18.09■□□□□ 0.49
SFTPBP07988 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SFTPBP07988 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
SFTPBP07988 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.09■□□□□ 0.49
SFTPBP07988 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SFTPBP07988 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SFTPBP07988 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SFTPBP07988 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SFTPBP07988 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.08■□□□□ 0.49
SFTPBP07988 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.08■□□□□ 0.49
SFTPBP07988 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SFTPBP07988 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SFTPBP07988 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SFTPBP07988 IGHV3-19-201ENST00000521488 291 ntBASIC18.08■□□□□ 0.48
SFTPBP07988 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.08■□□□□ 0.48
SFTPBP07988 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SFTPBP07988 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SFTPBP07988 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SFTPBP07988 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SFTPBP07988 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SFTPBP07988 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SFTPBP07988 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.07■□□□□ 0.48
SFTPBP07988 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SFTPBP07988 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.07■□□□□ 0.48
SFTPBP07988 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms