Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YMR103CYMR103C 363 nt8.55□□□□□ -1.04
YLR040CQ07988 CCT2YIL142W 1584 nt8.54□□□□□ -1.04
YLR040CQ07988 SAM2YDR502C 1155 nt8.53□□□□□ -1.04
YLR040CQ07988 TSC10YBR265W 963 nt8.53□□□□□ -1.04
YLR040CQ07988 HEL2YDR266C 1920 nt8.51□□□□□ -1.05
YLR040CQ07988 COQ8YGL119W 1506 nt8.5□□□□□ -1.05
YLR040CQ07988 SPP2YOR148C 558 nt8.5□□□□□ -1.05
YLR040CQ07988 MET8YBR213W 825 nt8.5□□□□□ -1.05
YLR040CQ07988 FMS1YMR020W 1527 nt8.49□□□□□ -1.05
YLR040CQ07988 YLR111WYLR111W 333 nt8.49□□□□□ -1.05
YLR040CQ07988 RSC8YFR037C 1674 nt8.49□□□□□ -1.05
YLR040CQ07988 NPP1YCR026C 2229 nt8.49□□□□□ -1.05
YLR040CQ07988 ARO8YGL202W 1503 nt8.49□□□□□ -1.05
YLR040CQ07988 HIS2YFR025C 1008 nt8.48□□□□□ -1.05
YLR040CQ07988 VPS62YGR141W 1404 nt8.47□□□□□ -1.05
YLR040CQ07988 YLR279WYLR279W 390 nt8.47□□□□□ -1.05
YLR040CQ07988 SEC61YLR378C 1443 nt8.46□□□□□ -1.05
YLR040CQ07988 SDH5YOL071W 489 nt8.46□□□□□ -1.06
YLR040CQ07988 BET2YPR176C 978 nt8.46□□□□□ -1.06
YLR040CQ07988 ACH1YBL015W 1581 nt8.46□□□□□ -1.06
YLR040CQ07988 YPS3YLR121C 1527 nt8.45□□□□□ -1.06
YLR040CQ07988 FLR1YBR008C 1647 nt8.45□□□□□ -1.06
YLR040CQ07988 KES1YPL145C 1305 nt8.45□□□□□ -1.06
YLR040CQ07988 DTR1YBR180W 1719 nt8.45□□□□□ -1.06
YLR040CQ07988 RFC1YOR217W 2586 nt8.44□□□□□ -1.06
YLR040CQ07988 UGA4YDL210W 1716 nt8.44□□□□□ -1.06
YLR040CQ07988 OXA1YER154W 1209 nt8.44□□□□□ -1.06
YLR040CQ07988 YGR012WYGR012W 1182 nt8.44□□□□□ -1.06
YLR040CQ07988 LSB6YJL100W 1824 nt8.43□□□□□ -1.06
YLR040CQ07988 ILV2YMR108W 2064 nt8.43□□□□□ -1.06
YLR040CQ07988 YDL086WYDL086W 822 nt8.43□□□□□ -1.06
YLR040CQ07988 MSB4YOL112W 1479 nt8.43□□□□□ -1.06
YLR040CQ07988 DLD2YDL178W 1593 nt8.43□□□□□ -1.06
YLR040CQ07988 UGP1YKL035W 1500 nt8.42□□□□□ -1.06
YLR040CQ07988 SGA1YIL099W 1650 nt8.42□□□□□ -1.06
YLR040CQ07988 APT2YDR441C 546 nt8.41□□□□□ -1.06
YLR040CQ07988 SFP1YLR403W 2052 nt8.41□□□□□ -1.06
YLR040CQ07988 MET2YNL277W 1461 nt8.39□□□□□ -1.07
YLR040CQ07988 QDR2YIL121W 1629 nt8.38□□□□□ -1.07
YLR040CQ07988 FCY21YER060W 1587 nt8.38□□□□□ -1.07
YLR040CQ07988 YMR209CYMR209C 1374 nt8.37□□□□□ -1.07
YLR040CQ07988 BNI5YNL166C 1347 nt8.37□□□□□ -1.07
YLR040CQ07988 HEM14YER014W 1620 nt8.36□□□□□ -1.07
YLR040CQ07988 YER188WYER188W 720 nt8.36□□□□□ -1.07
YLR040CQ07988 PHO23YNL097C 993 nt8.36□□□□□ -1.07
YLR040CQ07988 DIG1YPL049C 1359 nt8.35□□□□□ -1.07
YLR040CQ07988 MSC1YML128C 1542 nt8.35□□□□□ -1.07
YLR040CQ07988 RAD23YEL037C 1197 nt8.35□□□□□ -1.07
YLR040CQ07988 HEM13YDR044W 987 nt8.34□□□□□ -1.07
YLR040CQ07988 YPL222C-AYPL222C-A 246 nt8.34□□□□□ -1.07
YLR040CQ07988 FUB1YCR076C 753 nt8.33□□□□□ -1.08
YLR040CQ07988 OSH7YHR001W 1314 nt8.31□□□□□ -1.08
YLR040CQ07988 REG2YBR050C 1017 nt8.31□□□□□ -1.08
YLR040CQ07988 ZAP1YJL056C 2643 nt8.31□□□□□ -1.08
YLR040CQ07988 MAE1YKL029C 2010 nt8.3□□□□□ -1.08
YLR040CQ07988 NUC1YJL208C 990 nt8.3□□□□□ -1.08
YLR040CQ07988 GID8YMR135C 1368 nt8.29□□□□□ -1.08
YLR040CQ07988 CSM1YCR086W 573 nt8.28□□□□□ -1.08
YLR040CQ07988 PRY1YJL079C 900 nt8.28□□□□□ -1.08
YLR040CQ07988 GND1YHR183W 1470 nt8.27□□□□□ -1.09
YLR040CQ07988 RAS2YNL098C 969 nt8.27□□□□□ -1.09
YLR040CQ07988 RIB3YDR487C 627 nt8.25□□□□□ -1.09
YLR040CQ07988 PAM17YKR065C 594 nt8.25□□□□□ -1.09
YLR040CQ07988 SMM1YNR015W 1155 nt8.25□□□□□ -1.09
YLR040CQ07988 YKL133CYKL133C 1392 nt8.24□□□□□ -1.09
YLR040CQ07988 AIM1YAL046C 357 nt8.24□□□□□ -1.09
YLR040CQ07988 LSB5YCL034W 1065 nt8.24□□□□□ -1.09
YLR040CQ07988 MCM5YLR274W 2328 nt8.23□□□□□ -1.09
YLR040CQ07988 SOL2YCR073W-A 948 nt8.23□□□□□ -1.09
YLR040CQ07988 MRS6YOR370C 1812 nt8.23□□□□□ -1.09
YLR040CQ07988 DMA2YNL116W 1569 nt8.22□□□□□ -1.09
YLR040CQ07988 ODC1YPL134C 933 nt8.22□□□□□ -1.09
YLR040CQ07988 PSD1YNL169C 1503 nt8.22□□□□□ -1.09
YLR040CQ07988 TAT2YOL020W 1779 nt8.22□□□□□ -1.09
YLR040CQ07988 ASP3-1YLR155C 1089 nt8.21□□□□□ -1.1
YLR040CQ07988 ASP3-2YLR157C 1089 nt8.21□□□□□ -1.1
YLR040CQ07988 ASP3-3YLR158C 1089 nt8.21□□□□□ -1.1
YLR040CQ07988 ASP3-4YLR160C 1089 nt8.21□□□□□ -1.1
YLR040CQ07988 CYT1YOR065W 930 nt8.21□□□□□ -1.1
YLR040CQ07988 GTB1YDR221W 2109 nt8.21□□□□□ -1.1
YLR040CQ07988 ACO2YJL200C 2370 nt8.2□□□□□ -1.1
YLR040CQ07988 YEL009C-AYEL009C-A 408 nt8.2□□□□□ -1.1
YLR040CQ07988 ENT4YLL038C 744 nt8.2□□□□□ -1.1
YLR040CQ07988 YLR046CYLR046C 813 nt8.2□□□□□ -1.1
YLR040CQ07988 GPN2YOR262W 1044 nt8.2□□□□□ -1.1
YLR040CQ07988 RPT5YOR117W 1305 nt8.2□□□□□ -1.1
YLR040CQ07988 CAB5YDR196C 726 nt8.19□□□□□ -1.1
YLR040CQ07988 YHR219WYHR219W 1875 nt8.19□□□□□ -1.1
YLR040CQ07988 SSL2YIL143C 2532 nt8.19□□□□□ -1.1
YLR040CQ07988 LOT5YKL183W 921 nt8.18□□□□□ -1.1
YLR040CQ07988 SAM3YPL274W 1764 nt8.17□□□□□ -1.1
YLR040CQ07988 OYE2YHR179W 1203 nt8.17□□□□□ -1.1
YLR040CQ07988 YLR437C-AYLR437C-A 228 nt8.17□□□□□ -1.1
YLR040CQ07988 EAF3YPR023C 1206 nt8.17□□□□□ -1.1
YLR040CQ07988 RSC4YKR008W 1878 nt8.17□□□□□ -1.1
YLR040CQ07988 DLD3YEL071W 1491 nt8.16□□□□□ -1.1
YLR040CQ07988 STE4YOR212W 1272 nt8.16□□□□□ -1.1
YLR040CQ07988 YJL118WYJL118W 660 nt8.15□□□□□ -1.1
YLR040CQ07988 GAL2YLR081W 1725 nt8.15□□□□□ -1.11
YLR040CQ07988 LSB3YFR024C-A 1380 nt8.14□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms