Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 SMM1YNR015W 1155 nt9.69□□□□□ -0.86
YNL040WP53960 ILV3YJR016C 1758 nt9.68□□□□□ -0.86
YNL040WP53960 OYE3YPL171C 1203 nt9.67□□□□□ -0.86
YNL040WP53960 PRY1YJL079C 900 nt9.66□□□□□ -0.86
YNL040WP53960 YIL100C-AYIL100C-A 339 nt9.63□□□□□ -0.87
YNL040WP53960 PET8YNL003C 855 nt9.63□□□□□ -0.87
YNL040WP53960 SSN3YPL042C 1668 nt9.61□□□□□ -0.87
YNL040WP53960 CSM1YCR086W 573 nt9.6□□□□□ -0.87
YNL040WP53960 YPI1YFR003C 468 nt9.6□□□□□ -0.87
YNL040WP53960 SAM2YDR502C 1155 nt9.59□□□□□ -0.87
YNL040WP53960 SEC61YLR378C 1443 nt9.58□□□□□ -0.88
YNL040WP53960 COQ8YGL119W 1506 nt9.58□□□□□ -0.88
YNL040WP53960 CWC15YDR163W 528 nt9.58□□□□□ -0.88
YNL040WP53960 BNI5YNL166C 1347 nt9.57□□□□□ -0.88
YNL040WP53960 ARO8YGL202W 1503 nt9.57□□□□□ -0.88
YNL040WP53960 UGP1YKL035W 1500 nt9.57□□□□□ -0.88
YNL040WP53960 OXA1YER154W 1209 nt9.57□□□□□ -0.88
YNL040WP53960 PHO23YNL097C 993 nt9.57□□□□□ -0.88
YNL040WP53960 LSB3YFR024C-A 1380 nt9.57□□□□□ -0.88
YNL040WP53960 MSC1YML128C 1542 nt9.56□□□□□ -0.88
YNL040WP53960 CCT2YIL142W 1584 nt9.55□□□□□ -0.88
YNL040WP53960 HXT12YIL170W 1374 nt9.55□□□□□ -0.88
YNL040WP53960 YMR209CYMR209C 1374 nt9.55□□□□□ -0.88
YNL040WP53960 YNR029CYNR029C 1290 nt9.55□□□□□ -0.88
YNL040WP53960 OPI10YOL032W 741 nt9.55□□□□□ -0.88
YNL040WP53960 ADH1YOL086C 1047 nt9.55□□□□□ -0.88
YNL040WP53960 FLR1YBR008C 1647 nt9.54□□□□□ -0.88
YNL040WP53960 BET2YPR176C 978 nt9.54□□□□□ -0.88
YNL040WP53960 DLD2YDL178W 1593 nt9.53□□□□□ -0.88
YNL040WP53960 MAE1YKL029C 2010 nt9.53□□□□□ -0.88
YNL040WP53960 FMS1YMR020W 1527 nt9.52□□□□□ -0.88
YNL040WP53960 LSB6YJL100W 1824 nt9.52□□□□□ -0.89
YNL040WP53960 VRG4YGL225W 1014 nt9.52□□□□□ -0.89
YNL040WP53960 YJL055WYJL055W 738 nt9.52□□□□□ -0.89
YNL040WP53960 RIB2YOL066C 1776 nt9.52□□□□□ -0.89
YNL040WP53960 LSB5YCL034W 1065 nt9.51□□□□□ -0.89
YNL040WP53960 RSC8YFR037C 1674 nt9.51□□□□□ -0.89
YNL040WP53960 YPS3YLR121C 1527 nt9.51□□□□□ -0.89
YNL040WP53960 YER188WYER188W 720 nt9.5□□□□□ -0.89
YNL040WP53960 NUC1YJL208C 990 nt9.5□□□□□ -0.89
YNL040WP53960 SPP2YOR148C 558 nt9.5□□□□□ -0.89
YNL040WP53960 FUB1YCR076C 753 nt9.49□□□□□ -0.89
YNL040WP53960 HIS2YFR025C 1008 nt9.49□□□□□ -0.89
YNL040WP53960 KES1YPL145C 1305 nt9.49□□□□□ -0.89
YNL040WP53960 SAM3YPL274W 1764 nt9.48□□□□□ -0.89
YNL040WP53960 ACH1YBL015W 1581 nt9.48□□□□□ -0.89
YNL040WP53960 SGA1YIL099W 1650 nt9.48□□□□□ -0.89
YNL040WP53960 RPT5YOR117W 1305 nt9.46□□□□□ -0.9
YNL040WP53960 RAD51YER095W 1203 nt9.45□□□□□ -0.9
YNL040WP53960 YJL118WYJL118W 660 nt9.45□□□□□ -0.9
YNL040WP53960 YJL195CYJL195C 702 nt9.45□□□□□ -0.9
YNL040WP53960 HEM13YDR044W 987 nt9.43□□□□□ -0.9
YNL040WP53960 RAS2YNL098C 969 nt9.43□□□□□ -0.9
YNL040WP53960 ZAP1YJL056C 2643 nt9.42□□□□□ -0.9
YNL040WP53960 FUN14YAL008W 597 nt9.41□□□□□ -0.9
YNL040WP53960 GAL3YDR009W 1563 nt9.41□□□□□ -0.9
YNL040WP53960 ACO2YJL200C 2370 nt9.41□□□□□ -0.9
YNL040WP53960 OSH7YHR001W 1314 nt9.4□□□□□ -0.9
YNL040WP53960 VPS62YGR141W 1404 nt9.39□□□□□ -0.91
YNL040WP53960 OYE2YHR179W 1203 nt9.38□□□□□ -0.91
YNL040WP53960 EAF3YPR023C 1206 nt9.38□□□□□ -0.91
YNL040WP53960 TPS1YBR126C 1488 nt9.38□□□□□ -0.91
YNL040WP53960 RIB7YBR153W 735 nt9.37□□□□□ -0.91
YNL040WP53960 QDR2YIL121W 1629 nt9.36□□□□□ -0.91
YNL040WP53960 YDL086WYDL086W 822 nt9.35□□□□□ -0.91
YNL040WP53960 SOL2YCR073W-A 948 nt9.34□□□□□ -0.91
YNL040WP53960 TAT2YOL020W 1779 nt9.33□□□□□ -0.92
YNL040WP53960 GID8YMR135C 1368 nt9.33□□□□□ -0.92
YNL040WP53960 YEL008WYEL008W 381 nt9.32□□□□□ -0.92
YNL040WP53960 STE4YOR212W 1272 nt9.31□□□□□ -0.92
YNL040WP53960 MRS6YOR370C 1812 nt9.31□□□□□ -0.92
YNL040WP53960 YLR349WYLR349W 507 nt9.3□□□□□ -0.92
YNL040WP53960 RPM1RPM1 483 nt9.3□□□□□ -0.92
YNL040WP53960 PSD1YNL169C 1503 nt9.3□□□□□ -0.92
YNL040WP53960 CCT5YJR064W 1689 nt9.29□□□□□ -0.92
YNL040WP53960 LSM5YER146W 282 nt9.28□□□□□ -0.92
YNL040WP53960 TMA23YMR269W 636 nt9.28□□□□□ -0.92
YNL040WP53960 GPN2YOR262W 1044 nt9.28□□□□□ -0.92
YNL040WP53960 YDR455CYDR455C 309 nt9.27□□□□□ -0.93
YNL040WP53960 DDI1YER143W 1287 nt9.27□□□□□ -0.93
YNL040WP53960 ODC1YPL134C 933 nt9.27□□□□□ -0.93
YNL040WP53960 DIG1YPL049C 1359 nt9.26□□□□□ -0.93
YNL040WP53960 DMA2YNL116W 1569 nt9.26□□□□□ -0.93
YNL040WP53960 SNZ1YMR096W 894 nt9.26□□□□□ -0.93
YNL040WP53960 YKL133CYKL133C 1392 nt9.25□□□□□ -0.93
YNL040WP53960 ASP3-1YLR155C 1089 nt9.24□□□□□ -0.93
YNL040WP53960 ASP3-2YLR157C 1089 nt9.24□□□□□ -0.93
YNL040WP53960 ASP3-3YLR158C 1089 nt9.24□□□□□ -0.93
YNL040WP53960 ASP3-4YLR160C 1089 nt9.24□□□□□ -0.93
YNL040WP53960 MET2YNL277W 1461 nt9.23□□□□□ -0.93
YNL040WP53960 YHR219WYHR219W 1875 nt9.23□□□□□ -0.93
YNL040WP53960 SSL2YIL143C 2532 nt9.23□□□□□ -0.93
YNL040WP53960 DAK2YFL053W 1776 nt9.22□□□□□ -0.93
YNL040WP53960 IMO32YGR031W 1029 nt9.21□□□□□ -0.94
YNL040WP53960 AIM1YAL046C 357 nt9.21□□□□□ -0.94
YNL040WP53960 YPR126CYPR126C 309 nt9.21□□□□□ -0.94
YNL040WP53960 ERG13YML126C 1476 nt9.19□□□□□ -0.94
YNL040WP53960 YHL008CYHL008C 1884 nt9.19□□□□□ -0.94
YNL040WP53960 CYT1YOR065W 930 nt9.18□□□□□ -0.94
YNL040WP53960 THI72YOR192C 1800 nt9.18□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms