Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.03■■□□□ 1.63e-14■■■■■ 37.3
MATR3P43243 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.533e-14■■■■■ 37.3
MATR3P43243 BTBD7-207ENST00000554968 316 ntTSL 23.68□□□□□ -1.823e-14■■■■■ 37.3
MATR3P43243 AL162171.3-201ENST00000617439 3178 ntBASIC8.02□□□□□ -1.134e-20■■■■■ 37.3
MATR3P43243 MARK3-214ENST00000558698 498 ntTSL 46.57□□□□□ -1.365e-11■■■■■ 37.2
MATR3P43243 MARK3-224ENST00000561164 598 ntTSL 45.7□□□□□ -1.55e-11■■■■■ 37.2
MATR3P43243 MARK3-217ENST00000559268 560 ntTSL 45.26□□□□□ -1.575e-11■■■■■ 37.2
MATR3P43243 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.982e-6■■■■■ 37.2
MATR3P43243 MZF1-207ENST00000600004 2683 nt20.12■□□□□ 0.813e-8■■■■■ 36.9
MATR3P43243 MRNIP-203ENST00000517338 548 ntTSL 412.21□□□□□ -0.453e-9■■■■■ 36.8
MATR3P43243 PELP1-205ENST00000570823 484 ntTSL 424.88■■□□□ 1.573e-10■■■■■ 36.8
MATR3P43243 PELP1-207ENST00000571347 708 ntTSL 222.84■■□□□ 1.253e-10■■■■■ 36.8
MATR3P43243 CYTH1-213ENST00000590775 582 ntTSL 522.17■■□□□ 1.143e-10■■■■■ 36.8
MATR3P43243 PELP1-213ENST00000575101 442 ntTSL 320.84■□□□□ 0.933e-10■■■■■ 36.8
MATR3P43243 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.63e-10■■■■■ 36.8
MATR3P43243 PELP1-204ENST00000570571 902 ntTSL 318.01■□□□□ 0.473e-10■■■■■ 36.8
MATR3P43243 PELP1-214ENST00000575329 3280 ntTSL 217.49■□□□□ 0.393e-10■■■■■ 36.8
MATR3P43243 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.213e-10■■■■■ 36.8
MATR3P43243 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.99■□□□□ 0.153e-10■■■■■ 36.8
MATR3P43243 PELP1-211ENST00000573523 3878 ntTSL 215.65■□□□□ 0.13e-10■■■■■ 36.8
MATR3P43243 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.083e-10■■■■■ 36.8
MATR3P43243 CYTH1-214ENST00000591095 1097 ntTSL 1 (best)15.15■□□□□ 0.023e-10■■■■■ 36.8
MATR3P43243 CYTH1-212ENST00000590300 568 ntTSL 415.01□□□□□ -0.013e-10■■■■■ 36.8
MATR3P43243 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.71□□□□□ -0.053e-10■■■■■ 36.8
MATR3P43243 NR1H4-202ENST00000321046 1779 ntTSL 1 (best)14.64□□□□□ -0.073e-10■■■■■ 36.8
MATR3P43243 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.073e-10■■■■■ 36.8
MATR3P43243 CYTH1-210ENST00000589297 3756 ntTSL 5 BASIC13.49□□□□□ -0.253e-10■■■■■ 36.8
MATR3P43243 NR1H4-201ENST00000188403 1630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.453e-10■■■■■ 36.8
MATR3P43243 CYTH1-208ENST00000587308 553 ntTSL 511.92□□□□□ -0.53e-10■■■■■ 36.8
MATR3P43243 NR1H4-207ENST00000549996 1633 ntTSL 1 (best) BASIC11.52□□□□□ -0.573e-10■■■■■ 36.8
MATR3P43243 MFSD14C-206ENST00000637409 836 ntTSL 310.88□□□□□ -0.673e-10■■■■■ 36.8
MATR3P43243 CYTH1-204ENST00000586043 836 ntTSL 310.53□□□□□ -0.723e-10■■■■■ 36.8
MATR3P43243 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.93e-10■■■■■ 36.8
MATR3P43243 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.183e-10■■■■■ 36.8
MATR3P43243 MFSD14C-202ENST00000506067 548 ntTSL 57.6□□□□□ -1.193e-10■■■■■ 36.8
MATR3P43243 CYTH1-211ENST00000589768 988 ntTSL 37.31□□□□□ -1.243e-10■■■■■ 36.8
MATR3P43243 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.288e-9■■■■■ 36.8
MATR3P43243 ELF2-213ENST00000515489 510 ntTSL 26.15□□□□□ -1.421e-7■■■■■ 36.8
MATR3P43243 AL390879.2-203ENST00000426943 1121 ntBASIC5.39□□□□□ -1.558e-9■■■■■ 36.6
MATR3P43243 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.262e-7■■■■■ 36.5
MATR3P43243 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.625e-10■■■■■ 36.5
MATR3P43243 NDRG1-223ENST00000522665 411 ntTSL 216.48■□□□□ 0.231e-21■■■■■ 36.5
MATR3P43243 NDRG1-217ENST00000521414 2349 ntTSL 215.88■□□□□ 0.131e-21■■■■■ 36.5
MATR3P43243 NDRG1-216ENST00000521026 2145 ntTSL 215.46■□□□□ 0.071e-21■■■■■ 36.5
MATR3P43243 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.45■□□□□ 0.065e-10■■■■■ 36.5
MATR3P43243 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.23□□□□□ -0.135e-10■■■■■ 36.5
MATR3P43243 NDRG1-204ENST00000517599 2918 ntTSL 213.32□□□□□ -0.285e-10■■■■■ 36.5
MATR3P43243 NDRG1-226ENST00000523642 507 ntTSL 313.32□□□□□ -0.281e-21■■■■■ 36.5
MATR3P43243 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC13.09□□□□□ -0.315e-10■■■■■ 36.5
MATR3P43243 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC12.61□□□□□ -0.395e-10■■■■■ 36.5
MATR3P43243 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.515e-10■■■■■ 36.5
MATR3P43243 NDRG1-212ENST00000519278 3983 ntTSL 210.74□□□□□ -0.691e-21■■■■■ 36.5
MATR3P43243 EYA3-206ENST00000471498 1806 ntTSL 1 (best)10.51□□□□□ -0.732e-9■■■■■ 36.4
MATR3P43243 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC10□□□□□ -0.812e-9■■■■■ 36.4
MATR3P43243 CRY1-205ENST00000552790 3834 ntTSL 26.81□□□□□ -1.323e-8■■■■■ 36.3
MATR3P43243 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.82■■■□□ 2.523e-7■■■■■ 36.3
MATR3P43243 UBP1-205ENST00000456378 581 ntTSL 425.92■■□□□ 1.743e-7■■■■■ 36.3
MATR3P43243 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.073e-7■■■■■ 36.3
MATR3P43243 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.133e-7■■■■■ 36.3
MATR3P43243 UBP1-213ENST00000496310 544 ntTSL 47.73□□□□□ -1.173e-7■■■■■ 36.3
MATR3P43243 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.063e-6■■■■■ 36.3
MATR3P43243 AGPAT5-205ENST00000530716 573 ntTSL 35.21□□□□□ -1.582e-7■■■■■ 36.1
MATR3P43243 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.482e-9■■■■■ 36.1
MATR3P43243 SHQ1-202ENST00000444040 2844 ntTSL 217.57■□□□□ 0.42e-9■■■■■ 36.1
MATR3P43243 SHQ1-203ENST00000463369 2065 ntTSL 2 BASIC9.49□□□□□ -0.892e-9■■■■■ 36.1
MATR3P43243 SHQ1-205ENST00000468371 4024 ntTSL 1 (best)6.67□□□□□ -1.342e-9■■■■■ 36.1
MATR3P43243 PKIB-212ENST00000618977 464 ntTSL 310□□□□□ -0.812e-7■■■■■ 36
MATR3P43243 PKIB-210ENST00000608895 595 ntTSL 39.48□□□□□ -0.892e-7■■■■■ 36
MATR3P43243 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.28□□□□□ -1.082e-7■■■■■ 36
MATR3P43243 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.352e-7■■■■■ 36
MATR3P43243 PKIB-208ENST00000583007 394 ntTSL 55.15□□□□□ -1.592e-7■■■■■ 36
MATR3P43243 ZFPM2-204ENST00000518180 596 ntTSL 43.85□□□□□ -1.792e-7■■■■■ 35.9
MATR3P43243 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.62e-9■■■■■ 35.8
MATR3P43243 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.562e-9■■■■■ 35.8
MATR3P43243 MRNIP-215ENST00000521299 868 ntTSL 517.83■□□□□ 0.442e-9■■■■■ 35.8
MATR3P43243 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.442e-9■■■■■ 35.8
MATR3P43243 MRNIP-207ENST00000519208 662 ntTSL 417.1■□□□□ 0.332e-9■■■■■ 35.8
MATR3P43243 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.32e-9■■■■■ 35.8
MATR3P43243 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.77■□□□□ 0.282e-9■■■■■ 35.8
MATR3P43243 MRNIP-211ENST00000520150 1054 ntTSL 216.25■□□□□ 0.192e-9■■■■■ 35.8
MATR3P43243 MRNIP-222ENST00000523737 559 ntTSL 414.2□□□□□ -0.142e-9■■■■■ 35.8
MATR3P43243 MRNIP-219ENST00000522663 2879 ntTSL 1 (best)13.81□□□□□ -0.22e-9■■■■■ 35.8
MATR3P43243 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.342e-9■■■■■ 35.8
MATR3P43243 MRNIP-208ENST00000519213 579 ntTSL 412.55□□□□□ -0.42e-9■■■■■ 35.8
MATR3P43243 MRNIP-223ENST00000523835 503 ntTSL 512.21□□□□□ -0.452e-9■■■■■ 35.8
MATR3P43243 MRNIP-224ENST00000524068 556 ntTSL 411.43□□□□□ -0.582e-9■■■■■ 35.8
MATR3P43243 MRNIP-209ENST00000519318 848 ntTSL 210.63□□□□□ -0.712e-9■■■■■ 35.8
MATR3P43243 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.762e-9■■■■■ 35.8
MATR3P43243 MRNIP-214ENST00000520995 535 ntTSL 510.32□□□□□ -0.762e-9■■■■■ 35.8
MATR3P43243 MRNIP-218ENST00000522157 541 ntTSL 410.2□□□□□ -0.782e-9■■■■■ 35.8
MATR3P43243 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.611e-9■■■■■ 35.8
MATR3P43243 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.541e-9■■■■■ 35.8
MATR3P43243 MAP3K13-211ENST00000447637 618 ntTSL 214.85□□□□□ -0.036e-10■■■■■ 35.8
MATR3P43243 SEPT8-203ENST00000371493 562 ntTSL 413.66□□□□□ -0.226e-10■■■■■ 35.8
MATR3P43243 MAP3K13-205ENST00000433092 1460 ntTSL 1 (best)12.85□□□□□ -0.356e-10■■■■■ 35.8
MATR3P43243 RALGAPA2-206ENST00000620717 1432 ntTSL 5 BASIC12.74□□□□□ -0.373e-19■■■■■ 35.8
MATR3P43243 MAP3K13-210ENST00000446828 2737 ntTSL 2 BASIC12.63□□□□□ -0.396e-10■■■■■ 35.8
MATR3P43243 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC10.38□□□□□ -0.756e-10■■■■■ 35.8
MATR3P43243 RALGAPA2-203ENST00000427175 2623 ntTSL 29.71□□□□□ -0.863e-19■■■■■ 35.8
MATR3P43243 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.956e-10■■■■■ 35.8
Retrieved 100 of 16,209 protein–RNA pairs in 441.9 ms