RNA–Protein interactions for RNA: ENST00000590300.1

CYTH1-212, Transcript of cytohesin 1, humanhuman

TSL 4

Gene CYTH1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-212ENST00000590300 NISCHQ9Y2I1 1504 aa32.72■■■□□ 2.83
CYTH1-212ENST00000590300 CCDC180Q9P1Z9 1646 aa28.92■■■□□ 2.22
CYTH1-212ENST00000590300 ABCC9O60706 1549 aa27.77■■■□□ 2.04
CYTH1-212ENST00000590300 ZCCHC6Q5VYS8 1495 aaKnown RBP27.41■■□□□ 1.98
CYTH1-212ENST00000590300 DCAF1Q9Y4B6 1507 aa27.14■■□□□ 1.94
CYTH1-212ENST00000590300 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
CYTH1-212ENST00000590300 NACADO15069 1562 aa27.05■■□□□ 1.92
CYTH1-212ENST00000590300 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
CYTH1-212ENST00000590300 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
CYTH1-212ENST00000590300 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
CYTH1-212ENST00000590300 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
CYTH1-212ENST00000590300 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
CYTH1-212ENST00000590300 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
CYTH1-212ENST00000590300 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
CYTH1-212ENST00000590300 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
CYTH1-212ENST00000590300 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
CYTH1-212ENST00000590300 BAZ1AQ9NRL2 1556 aaPredicted RBP25.34■■□□□ 1.65
CYTH1-212ENST00000590300 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
CYTH1-212ENST00000590300 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
CYTH1-212ENST00000590300 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
CYTH1-212ENST00000590300 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
CYTH1-212ENST00000590300 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
CYTH1-212ENST00000590300 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
CYTH1-212ENST00000590300 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
CYTH1-212ENST00000590300 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
CYTH1-212ENST00000590300 WIZO95785 1651 aa24.95■■□□□ 1.58
CYTH1-212ENST00000590300 NCAPD3P42695 1498 aa24.94■■□□□ 1.58
CYTH1-212ENST00000590300 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
CYTH1-212ENST00000590300 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
CYTH1-212ENST00000590300 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
CYTH1-212ENST00000590300 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
CYTH1-212ENST00000590300 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
CYTH1-212ENST00000590300 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
CYTH1-212ENST00000590300 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
CYTH1-212ENST00000590300 CFTRP13569 1480 aa24.2■■□□□ 1.47
CYTH1-212ENST00000590300 NESP48681 1621 aa24.18■■□□□ 1.46
CYTH1-212ENST00000590300 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
CYTH1-212ENST00000590300 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
CYTH1-212ENST00000590300 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
CYTH1-212ENST00000590300 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
CYTH1-212ENST00000590300 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
CYTH1-212ENST00000590300 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
CYTH1-212ENST00000590300 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
CYTH1-212ENST00000590300 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
CYTH1-212ENST00000590300 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
CYTH1-212ENST00000590300 WDR62O43379 1518 aa23.7■■□□□ 1.38
CYTH1-212ENST00000590300 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
CYTH1-212ENST00000590300 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
CYTH1-212ENST00000590300 CUX1P39880 1505 aa23.65■■□□□ 1.38
CYTH1-212ENST00000590300 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
CYTH1-212ENST00000590300 TOPBP1Q92547 1522 aa23.64■■□□□ 1.38
CYTH1-212ENST00000590300 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
CYTH1-212ENST00000590300 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.36
CYTH1-212ENST00000590300 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
CYTH1-212ENST00000590300 CUX2O14529 1486 aa23.51■■□□□ 1.35
CYTH1-212ENST00000590300 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
CYTH1-212ENST00000590300 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
CYTH1-212ENST00000590300 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
CYTH1-212ENST00000590300 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
CYTH1-212ENST00000590300 TARBP1Q13395 1621 aaKnown RBP23.36■■□□□ 1.33
CYTH1-212ENST00000590300 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
CYTH1-212ENST00000590300 SOGA1O94964 1423 aa23.33■■□□□ 1.33
CYTH1-212ENST00000590300 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
CYTH1-212ENST00000590300 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
CYTH1-212ENST00000590300 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
CYTH1-212ENST00000590300 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
CYTH1-212ENST00000590300 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
CYTH1-212ENST00000590300 ABCA5Q8WWZ7 1642 aa23.19■■□□□ 1.3
CYTH1-212ENST00000590300 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.29
CYTH1-212ENST00000590300 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
CYTH1-212ENST00000590300 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.297e-6■■□□□ 12.2
CYTH1-212ENST00000590300 GAPVD1Q14C86 1478 aa23.1■■□□□ 1.29
CYTH1-212ENST00000590300 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
CYTH1-212ENST00000590300 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
CYTH1-212ENST00000590300 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
CYTH1-212ENST00000590300 ERICH3Q5RHP9 1530 aa23.02■■□□□ 1.28
CYTH1-212ENST00000590300 EEA1Q15075 1411 aa23.01■■□□□ 1.27
CYTH1-212ENST00000590300 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
CYTH1-212ENST00000590300 MAGI1Q96QZ7 1491 aaPredicted RBP22.96■■□□□ 1.27
CYTH1-212ENST00000590300 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
CYTH1-212ENST00000590300 IGF1RP08069 1367 aa22.92■■□□□ 1.26
CYTH1-212ENST00000590300 CUL7Q14999 1698 aa22.91■■□□□ 1.26
CYTH1-212ENST00000590300 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
CYTH1-212ENST00000590300 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
CYTH1-212ENST00000590300 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
CYTH1-212ENST00000590300 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
CYTH1-212ENST00000590300 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
CYTH1-212ENST00000590300 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
CYTH1-212ENST00000590300 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
CYTH1-212ENST00000590300 CHD1O14646 1710 aa22.76■■□□□ 1.23
CYTH1-212ENST00000590300 KIF21BO75037 1637 aa22.75■■□□□ 1.23
CYTH1-212ENST00000590300 RAPGEF2Q9Y4G8 1499 aa22.75■■□□□ 1.23
CYTH1-212ENST00000590300 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
CYTH1-212ENST00000590300 NUP160Q12769 1436 aa22.66■■□□□ 1.22
CYTH1-212ENST00000590300 FBLN2P98095 1184 aa22.66■■□□□ 1.22
CYTH1-212ENST00000590300 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
CYTH1-212ENST00000590300 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
CYTH1-212ENST00000590300 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
CYTH1-212ENST00000590300 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
CYTH1-212ENST00000590300 KIAA0586Q9BVV6 1533 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms