RNA–Protein interactions for RNA: ENST00000447404.6

STRBP-204, Transcript of spermatid perinuclear RNA binding protein, human

APPRIS P1 TSL 2 BASIC

Gene STRBP, Length 6,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRBP-204	ENST00000447404	DCAF8L2	P0C7V8	631 aa		11.2	□□□□□ -0.62
STRBP-204	ENST00000447404	NISCH	Q9Y2I1	1504 aa		10.46	□□□□□ -0.74
STRBP-204	ENST00000447404	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.19	□□□□□ -0.78
STRBP-204	ENST00000447404	ABCC9	O60706	1549 aa		9.71	□□□□□ -0.86
STRBP-204	ENST00000447404	SUPT5H	O00267	1087 aa	Known RBP	9.68	□□□□□ -0.86
STRBP-204	ENST00000447404	SHROOM4	Q9ULL8	1493 aa		9.67	□□□□□ -0.86
STRBP-204	ENST00000447404	MYT1L	Q9UL68	1186 aa		9.55	□□□□□ -0.88
STRBP-204	ENST00000447404	PABPN1	Q86U42	306 aa	Known RBP eCLIP	9.55	□□□□□ -0.88
STRBP-204	ENST00000447404	APLP2	Q06481	763 aa		9.54	□□□□□ -0.88
STRBP-204	ENST00000447404	ATP1B4	Q9UN42	357 aa	Predicted RBP	9.46	□□□□□ -0.89
STRBP-204	ENST00000447404	TTBK1	Q5TCY1	1321 aa	Predicted RBP	9.43	□□□□□ -0.9
STRBP-204	ENST00000447404	EHMT2	Q96KQ7	1210 aa		9.4	□□□□□ -0.9
STRBP-204	ENST00000447404	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	9.39	□□□□□ -0.91
STRBP-204	ENST00000447404	HNRNPUL2	Q1KMD3	747 aa	Known RBP	9.39	□□□□□ -0.91
STRBP-204	ENST00000447404	FBLN2	P98095	1184 aa		9.36	□□□□□ -0.91
STRBP-204	ENST00000447404	RANGAP1	P46060	587 aa	Predicted RBP	9.33	□□□□□ -0.92
STRBP-204	ENST00000447404	NPM1	P06748	294 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
STRBP-204	ENST00000447404	CHIC1	Q5VXU3	224 aa		9.18	□□□□□ -0.94
STRBP-204	ENST00000447404	AEBP2	Q6ZN18	517 aa	Predicted RBP	9.17	□□□□□ -0.94
STRBP-204	ENST00000447404	ESF1	Q9H501	851 aa	Known RBP	9.17	□□□□□ -0.94
STRBP-204	ENST00000447404	TRH	P20396	242 aa	Predicted RBP	9.16	□□□□□ -0.94
STRBP-204	ENST00000447404	UBTF	P17480	764 aa	Known RBP	9.13	□□□□□ -0.95
STRBP-204	ENST00000447404	TRIM41	Q8WV44	630 aa		9.09	□□□□□ -0.96
STRBP-204	ENST00000447404	PLPPR3	Q6T4P5	718 aa		9.05	□□□□□ -0.96
STRBP-204	ENST00000447404	ERCC6	Q03468	1493 aa		9.04	□□□□□ -0.96
STRBP-204	ENST00000447404	BCAN	Q96GW7	911 aa		9.02	□□□□□ -0.97
STRBP-204	ENST00000447404	RB1CC1	Q8TDY2	1594 aa		8.95	□□□□□ -0.98
STRBP-204	ENST00000447404	CHMP7	Q8WUX9	453 aa	Predicted RBP	8.93	□□□□□ -0.98
STRBP-204	ENST00000447404	ARID4B	Q4LE39	1312 aa	Predicted RBP	8.86	□□□□□ -0.99
STRBP-204	ENST00000447404	SCRIB	Q14160	1630 aa		8.86	□□□□□ -0.99
STRBP-204	ENST00000447404	STAG3	Q9UJ98	1225 aa		8.85	□□□□□ -0.99
STRBP-204	ENST00000447404	SLC4A1AP	Q9BWU0	796 aa	Known RBP	8.82	□□□□□ -1
STRBP-204	ENST00000447404	CDK11A	Q9UQ88	783 aa	Predicted RBP	8.81	□□□□□ -1
STRBP-204	ENST00000447404	ARID3C	A6NKF2	412 aa		8.75	□□□□□ -1.01
STRBP-204	ENST00000447404	SCAF1	Q9H7N4	1312 aa	Known RBP	8.74	□□□□□ -1.01
STRBP-204	ENST00000447404	C14orf37	Q86TY3	774 aa		8.71	□□□□□ -1.02
STRBP-204	ENST00000447404	NACAD	O15069	1562 aa		8.7	□□□□□ -1.02
STRBP-204	ENST00000447404	ZNF777	Q9ULD5	760 aa	Predicted RBP	8.69	□□□□□ -1.02
STRBP-204	ENST00000447404	ITGAE	P38570	1179 aa		8.69	□□□□□ -1.02
STRBP-204	ENST00000447404	CCDC180	Q9P1Z9	1646 aa		8.67	□□□□□ -1.02
STRBP-204	ENST00000447404	CECR2	Q9BXF3	1484 aa		8.66	□□□□□ -1.02
STRBP-204	ENST00000447404	OSCAR	Q8IYS5	282 aa		8.65	□□□□□ -1.02
STRBP-204	ENST00000447404	KCNH8	Q96L42	1107 aa		8.65	□□□□□ -1.03
STRBP-204	ENST00000447404	HAP1	P54257	671 aa	Predicted RBP	8.65	□□□□□ -1.03
STRBP-204	ENST00000447404	CHGA	P10645	457 aa	Known RBP	8.64	□□□□□ -1.03
STRBP-204	ENST00000447404	P3H3	Q8IVL6	736 aa		8.62	□□□□□ -1.03
STRBP-204	ENST00000447404	POLR3GL	Q9BT43	218 aa		8.62	□□□□□ -1.03
STRBP-204	ENST00000447404	TRIM52	Q96A61	297 aa		8.61	□□□□□ -1.03
STRBP-204	ENST00000447404	PDS5B	Q9NTI5	1447 aa		8.6	□□□□□ -1.03
STRBP-204	ENST00000447404		A0A0G2JS52	829 aa		8.6	□□□□□ -1.03
STRBP-204	ENST00000447404	PPP1R15A	O75807	674 aa	Predicted RBP	8.6	□□□□□ -1.03
STRBP-204	ENST00000447404	FAM50A	Q14320	339 aa	Known RBP	8.59	□□□□□ -1.03
STRBP-204	ENST00000447404	CYB5RL	Q6IPT4	315 aa		8.58	□□□□□ -1.04
STRBP-204	ENST00000447404	BAZ1B	Q9UIG0	1483 aa	Known RBP	8.57	□□□□□ -1.04
STRBP-204	ENST00000447404	SLC24A1	O60721	1099 aa		8.56	□□□□□ -1.04
STRBP-204	ENST00000447404	MYT1	Q01538	1121 aa		8.56	□□□□□ -1.04
STRBP-204	ENST00000447404	SENP3	Q9H4L4	574 aa	Predicted RBP	8.55	□□□□□ -1.04
STRBP-204	ENST00000447404	DCAF8L1	A6NGE4	600 aa		8.54	□□□□□ -1.04
STRBP-204	ENST00000447404	PLEKHD1	A6NEE1	506 aa		8.53	□□□□□ -1.04
STRBP-204	ENST00000447404	FOXD1	Q16676	465 aa		8.53	□□□□□ -1.04
STRBP-204	ENST00000447404	MLEC	Q14165	292 aa		8.51	□□□□□ -1.05
STRBP-204	ENST00000447404	TSPY4	P0CV99	314 aa		8.49	□□□□□ -1.05
STRBP-204	ENST00000447404	TSPY10	P0CW01	314 aa		8.49	□□□□□ -1.05
STRBP-204	ENST00000447404	PHF23	Q9BUL5	403 aa	Predicted RBP	8.48	□□□□□ -1.05
STRBP-204	ENST00000447404	NPM2	Q86SE8	214 aa	Known RBP	8.48	□□□□□ -1.05
STRBP-204	ENST00000447404	NEFM	P07197	916 aa		8.48	□□□□□ -1.05
STRBP-204	ENST00000447404	PCGF6	Q9BYE7	350 aa		8.45	□□□□□ -1.06
STRBP-204	ENST00000447404	HDGF	P51858	240 aa	Known RBP	8.45	□□□□□ -1.06
STRBP-204	ENST00000447404	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	8.45	□□□□□ -1.06	4e-9	■■□□□ 11.6
STRBP-204	ENST00000447404	PLEKHG5	O94827	1062 aa		8.43	□□□□□ -1.06
STRBP-204	ENST00000447404	ZNF326	Q5BKZ1	582 aa	Known RBP	8.43	□□□□□ -1.06
STRBP-204	ENST00000447404	ZBTB7C	A1YPR0	619 aa		8.41	□□□□□ -1.06
STRBP-204	ENST00000447404	CCER1	Q8TC90	406 aa	Predicted RBP	8.4	□□□□□ -1.07
STRBP-204	ENST00000447404	MEX3C	Q5U5Q3	659 aa	Known RBP	8.39	□□□□□ -1.07
STRBP-204	ENST00000447404	LMOD2	Q6P5Q4	547 aa		8.38	□□□□□ -1.07
STRBP-204	ENST00000447404	CARMIL2	Q6F5E8	1435 aa		8.37	□□□□□ -1.07
STRBP-204	ENST00000447404	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.36	□□□□□ -1.07
STRBP-204	ENST00000447404	CSRNP3	Q8WYN3	585 aa		8.36	□□□□□ -1.07
STRBP-204	ENST00000447404	ZCCHC6	Q5VYS8	1495 aa	Known RBP	8.36	□□□□□ -1.07
STRBP-204	ENST00000447404	CNGB1	Q14028	1251 aa	Predicted RBP	8.36	□□□□□ -1.07
STRBP-204	ENST00000447404	FAM69C	Q0P6D2	419 aa		8.35	□□□□□ -1.07
STRBP-204	ENST00000447404	PELP1	Q8IZL8	1130 aa	Known RBP	8.34	□□□□□ -1.07
STRBP-204	ENST00000447404	CCDC9	Q9Y3X0	531 aa	Known RBP	8.34	□□□□□ -1.07
STRBP-204	ENST00000447404	SMARCA2	P51531	1590 aa		8.32	□□□□□ -1.08
STRBP-204	ENST00000447404	NPHP1	O15259	732 aa		8.3	□□□□□ -1.08
STRBP-204	ENST00000447404	EID1	Q9Y6B2	187 aa		8.3	□□□□□ -1.08
STRBP-204	ENST00000447404	CEP164	Q9UPV0	1460 aa		8.29	□□□□□ -1.08
STRBP-204	ENST00000447404	MTUS2	Q5JR59	1369 aa		8.28	□□□□□ -1.08
STRBP-204	ENST00000447404	CFDP1	Q9UEE9	299 aa	Predicted RBP	8.26	□□□□□ -1.09
STRBP-204	ENST00000447404	CADPS	Q9ULU8	1353 aa		8.26	□□□□□ -1.09
STRBP-204	ENST00000447404	EIF4G1	Q04637	1599 aa	Known RBP	8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	WRN	Q14191	1432 aa	Predicted RBP eCLIP	8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	KANK1	Q14678	1352 aa		8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	SF3B2	Q13435	895 aa	Known RBP	8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	GGT6	Q6P531	493 aa		8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	ZBTB47	Q9UFB7	747 aa	Predicted RBP	8.25	□□□□□ -1.09
STRBP-204	ENST00000447404	KIF27	Q86VH2	1401 aa		8.24	□□□□□ -1.09
STRBP-204	ENST00000447404	DNAJC5B	Q9UF47	199 aa		8.24	□□□□□ -1.09
STRBP-204	ENST00000447404	SOGA1	O94964	1423 aa		8.24	□□□□□ -1.09

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