RNA–Protein interactions for RNA: ENST00000523642.1

NDRG1-226, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-226ENST00000523642 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
NDRG1-226ENST00000523642 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.7
NDRG1-226ENST00000523642 ABCC9O60706 1549 aa25.04■■□□□ 1.6
NDRG1-226ENST00000523642 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
NDRG1-226ENST00000523642 NACADO15069 1562 aa24.22■■□□□ 1.47
NDRG1-226ENST00000523642 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.47
NDRG1-226ENST00000523642 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
NDRG1-226ENST00000523642 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
NDRG1-226ENST00000523642 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
NDRG1-226ENST00000523642 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
NDRG1-226ENST00000523642 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
NDRG1-226ENST00000523642 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
NDRG1-226ENST00000523642 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
NDRG1-226ENST00000523642 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
NDRG1-226ENST00000523642 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
NDRG1-226ENST00000523642 EIF4G1Q04637 1599 aaKnown RBP22.77■■□□□ 1.24
NDRG1-226ENST00000523642 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
NDRG1-226ENST00000523642 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
NDRG1-226ENST00000523642 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
NDRG1-226ENST00000523642 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
NDRG1-226ENST00000523642 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
NDRG1-226ENST00000523642 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
NDRG1-226ENST00000523642 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
NDRG1-226ENST00000523642 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
NDRG1-226ENST00000523642 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
NDRG1-226ENST00000523642 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
NDRG1-226ENST00000523642 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
NDRG1-226ENST00000523642 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
NDRG1-226ENST00000523642 WIZO95785 1651 aa22.01■■□□□ 1.11
NDRG1-226ENST00000523642 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
NDRG1-226ENST00000523642 CADPSQ9ULU8 1353 aa21.73■■□□□ 1.07
NDRG1-226ENST00000523642 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
NDRG1-226ENST00000523642 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
NDRG1-226ENST00000523642 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
NDRG1-226ENST00000523642 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
NDRG1-226ENST00000523642 NESP48681 1621 aa21.64■■□□□ 1.05
NDRG1-226ENST00000523642 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
NDRG1-226ENST00000523642 CFTRP13569 1480 aa21.58■■□□□ 1.04
NDRG1-226ENST00000523642 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
NDRG1-226ENST00000523642 CUX2O14529 1486 aa21.4■■□□□ 1.02
NDRG1-226ENST00000523642 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
NDRG1-226ENST00000523642 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
NDRG1-226ENST00000523642 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
NDRG1-226ENST00000523642 PRDM2Q13029 1718 aa21.3■■□□□ 1
NDRG1-226ENST00000523642 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
NDRG1-226ENST00000523642 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
NDRG1-226ENST00000523642 WDR62O43379 1518 aa21.22■□□□□ 0.99
NDRG1-226ENST00000523642 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.97
NDRG1-226ENST00000523642 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
NDRG1-226ENST00000523642 DNMBPQ6XZF7 1577 aa21.05■□□□□ 0.96
NDRG1-226ENST00000523642 IFT140Q96RY7 1462 aa20.98■□□□□ 0.95
NDRG1-226ENST00000523642 SOGA1O94964 1423 aa20.9■□□□□ 0.94
NDRG1-226ENST00000523642 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
NDRG1-226ENST00000523642 CUX1P39880 1505 aa20.89■□□□□ 0.94
NDRG1-226ENST00000523642 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
NDRG1-226ENST00000523642 FGD5Q6ZNL6 1462 aa20.85■□□□□ 0.93
NDRG1-226ENST00000523642 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
NDRG1-226ENST00000523642 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
NDRG1-226ENST00000523642 TARBP1Q13395 1621 aaKnown RBP20.77■□□□□ 0.92
NDRG1-226ENST00000523642 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
NDRG1-226ENST00000523642 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
NDRG1-226ENST00000523642 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
NDRG1-226ENST00000523642 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
NDRG1-226ENST00000523642 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.913e-13■■■■■ 33.4
NDRG1-226ENST00000523642 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
NDRG1-226ENST00000523642 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
NDRG1-226ENST00000523642 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
NDRG1-226ENST00000523642 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
NDRG1-226ENST00000523642 OSCARQ8IYS5 282 aa20.64■□□□□ 0.89
NDRG1-226ENST00000523642 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
NDRG1-226ENST00000523642 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
NDRG1-226ENST00000523642 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
NDRG1-226ENST00000523642 FBLN2P98095 1184 aa20.57■□□□□ 0.88
NDRG1-226ENST00000523642 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
NDRG1-226ENST00000523642 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
NDRG1-226ENST00000523642 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
NDRG1-226ENST00000523642 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
NDRG1-226ENST00000523642 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
NDRG1-226ENST00000523642 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
NDRG1-226ENST00000523642 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
NDRG1-226ENST00000523642 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
NDRG1-226ENST00000523642 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
NDRG1-226ENST00000523642 IGF1RP08069 1367 aa20.38■□□□□ 0.85
NDRG1-226ENST00000523642 CHD1O14646 1710 aa20.34■□□□□ 0.85
NDRG1-226ENST00000523642 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
NDRG1-226ENST00000523642 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
NDRG1-226ENST00000523642 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
NDRG1-226ENST00000523642 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
NDRG1-226ENST00000523642 CUL7Q14999 1698 aa20.27■□□□□ 0.84
NDRG1-226ENST00000523642 EEA1Q15075 1411 aa20.23■□□□□ 0.83
NDRG1-226ENST00000523642 NUP160Q12769 1436 aa20.21■□□□□ 0.83
NDRG1-226ENST00000523642 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
NDRG1-226ENST00000523642 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
NDRG1-226ENST00000523642 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
NDRG1-226ENST00000523642 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
NDRG1-226ENST00000523642 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
NDRG1-226ENST00000523642 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
NDRG1-226ENST00000523642 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
NDRG1-226ENST00000523642 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
NDRG1-226ENST00000523642 RIMBP3CA6NJZ7 1639 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms